Pseudomonas sp. LAMO17WK12:I4, D885_RS0124920
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAMO17WK12:I4 D885DRAFT_scaffold00008.8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGTTGCGGCAGCTTCTGCAGCTGCTCGACCACCCGCGGCAGGTCGGCCAGGTGGTCGCGTTCGATTTCGATCAGGCGCAGGCCGGCGCCGGCATGTTC GGCCAGCAAGGCACGTACCAGCGACGACTTGCCAGTACCGCGCGAGCCCCACAGCAATGCGTGGTTGGCCGGCAGGCCGTTGATGAACTGGTGGGTGTTG CGGCCCAGCTGGTCGCGCTGTTTGTCGACACCGATCAGGTCGGTCAGGCGGATATCCAGGCTGACGTCCAGCGGCAGCAGGTAACCACTGCGGCCATCGC GCTGCCAGCGGGCGGCCAGAGTGACGCCCCAGTCGATGTTCGGGCGCTGTGCCGGCAACAGGGGTTCGAGGCGCGCCAGTACCGATTCGGCGCGGTCCAG GAAAGCAATCAAGCGAGCGTCCATGACGACTCCTAACAAGACAGGTGAGATTTCCAGCTGAATGTGTGACAGGCCCGCCAGCTGCCGGGGCTATTCGGCT
|
|
| DNA Sequence for Gene |
>D885_RS0124920
ATGCTTGCGCAGCGCAAGGGACGTGAAACCGGCTCGGGACTCATGGATATCAAGTTCACCAATCGCCTGTCATACAAGCAAGCCCGGTTGACAGTCCTGG TCGGCTTCATCCTGGGAACATTGCTCAGTCTCATCCAGATCGGCATCGATTATGCCAGCGAAGACGCGTCCATCAACCGCGAAGTGCGCGCGTTGCTGCA AATCAGCCACAACCCGGCCTCGCGCATCGCCTACAACATCGACGCGGAACTGGCGCTGGAGCTGACCCGTGGCCTGCTGCAGTCGCCCGCCGTCGTCCGC GCGCGGCTGATCGACAACAACGAAACGGTACTGGCCGACGTCGAGCGGCCCAGGCTGGAGGACCGCTACCGGCCACTGAGCGACTTTCTGTTCGGCGAAC AACGCCAGTTCAAGGAACGCCTGTACCTCACCCACATGCCCGAGGAATACCTCGGCACCCTGTACCTGGACGTCGACACCTACGCCTTCGGCAGCCGCTT CCTCGACCGCGCCGGCATCACCCTGCTCAACGGCTTTGCCCGCAGCCTGGTGCTGACCGGCATCCTGCTGGCGTTGTTCTACATGATGCTGACCAAGCCA CTGGTGACAGTGATCGGCGCACTCAGCGGCAGCGACCCGCGCAAACCCCGGCAAACCCGCCTTGAATGCCCACACGGGCACGAACACGACGAAATCGGCG TGCTGGTGAAGGTCGCCAACCAGCAGTTCGTCAGCATGGCCACCGAGATCGAACAACGGCGCACCGCGGAAAACCGCCTGACCCAGTACCTGAACGAGCT GGAAGACATCGTCTCGGCACGCACCAACGAGCTGAAAGCCAGCAACAGCAGCCTGAGCCTGTCCAACCAGGAGCTGGAACAGGCCCGCAGCCGCGCGCTG GACATGGCCCAGGCGCGCGCCGCCTTCCTGGCCAACATGAGCCACGAAATCCGCACCCCGCTCAATGGCATGCTCGGCATGATCGCCCTGGCGCTGGACA ACCCGTTGCCCAGCGAGCAACGCCAGCAACTGGCGATTGCCCACGACTCGGGCAAGGTGCTGGTGGAACTGCTGAACGATATCCTCGACCTGTCCAAGTT CGATGCCGGCCAGCTGGAACTGGAGCGCATTGCGTTCGACATGGGCTCGATGGTGGAAGACACCGCCAACCTGCTGTCGCAGAACACCGCGCAAAGTGTG GAGCTGACCTGCCTGATCGCCCGCGACTTCCCCAGCACCGTGCTTGGCGACCCCACGCGGGTACGGCAGATCGTCAGCAACCTGCTGTCCAACGCGCTCA AGTTCACCCGCTTCGGCCGTGTCGACATACGCCTGGTGACGATCGTCGGCGGCGTGCGCCTGGAGGTACGTGATACCGGCATTGGCATCCCCGAAGAAGC CCAGGCGCGGATCTTCCAGCCGTTCACCCAGGCCGGTGCCGGCATCACCCGCCAGTACGGTGGCACCGGCCTGGGCCTGGCGCTGACTCGCAACCTGTGC AAGGCCATGCAAGGCCACCTGCACATTCGCTCCGAACCGGGCTTCGGCAGCTGCTTCACGGCCGAGCTGCCACTGCCGGTGCACACCGAAGCCATCCCGC CGACACCGCTACATGGCCGCGTGGCCGCGCTAAGCGCGGCCGGTAGCGGGCTTAATGAACTGCTGCAGAACCTGCTGCCCGCCTGGGGCCTGGCCTACCA GCGCCATGACAGCAGCGCCACGCTGGACACCACAGCGATCGACCTGCTGATCACCGACGACGTGGACCACCTGTTCGAACTGCGCCCGGCACTGAAAACG CCGATTCTGCTGGTAACCGCCTACGGCAACTTCCTGCCCAACGAGCAGTCGCTGGCCTTGGCACCCTTGCATCAACTGGCCCGGCCATTGGCACGTAACG CCCTGTACCAGACGCTGCGCCGCACCTTGCAAGGCCATGAGCCCGAGCACCCTCTGGCCACCCCGGCCATTAGCCTGGAGCAAGGGCGAGCGCGGATTTT GCTGGTAGAAGACAACCCGGTGAACCAGCTCGTGGCCAAAGGCATGCTGGCCAAGCTCGGCTGCCAGGTGCAGCTGGCCACCCAGGGCGCCGAGGCTCTG GAGTTGCTGGAGCAGGATGAATTCGACCTGATACTGATGGACTGCAACATGCCGGTCATGGACGGCTATGAAGCCAGCCGGCGCATCCGCCAGAGCGGTC GCTGGCCACACCTGCCTATCGTTGCGCTCACCGCCAACGCCATGCCCGAAGAGCGCGAACGCTGCCGGGCGGCGGGCATGAGCGACTACCTGGCCAAGCC GTTCCGCCGCGAAGAGCTACTGGCCCTGGTCGACCACTGGGTGCCCTTCAACGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCAAACGCTCGATGTCCGCTTCCAGGGCCTGCGGTTTGGTGGTGGGCGCGTAACGCGTGACCTGGCCGCTGGCCGGGTCGACCAGAAACTTGGTGAAATT CCACTTGATCTTCTGGCTACCCAGAATGCCCGGGGCGCGTTGTTTGAGCTCGACGAACAGCGCGTGAGCGCCCGGGCCGTTGACCTCGATCTTGCGAAAC AGCGGAAAGCTTACGCCGAAGTTGCGCTCGCAAAACTGCGCAATGTCCCGTGCATCGCCTGGTTCCTGCTTGCCGAACTGGTTGCAGGGAAAGCCCAGCA CCACCAGGCCACGCGCGCGGTAGGCTTGCCACAGTTGCTCAAGGCCTTTGTACTGCGGGGTAAAGCCGCACTGGCTGGCGGTATTGACCACCAGCAGCGC CTTGCCAGGGAAGTCGCCAAGCTTCTTGTGCTCGCCGCCCAGGGTTACGCAGGGGATGTCCAGCATCGATCCAGCCATGGTCGGGCTCCGGTCAGTCGCG
|
|
| Amino Acid Sequence |
>histidine kinase
MLAQRKGRETGSGLMDIKFTNRLSYKQARLTVLVGFILGTLLSLIQIGIDYASEDASINREVRALLQISHNPASRIAYNIDAELALELTRGLLQSPAVVR ARLIDNNETVLADVERPRLEDRYRPLSDFLFGEQRQFKERLYLTHMPEEYLGTLYLDVDTYAFGSRFLDRAGITLLNGFARSLVLTGILLALFYMMLTKP LVTVIGALSGSDPRKPRQTRLECPHGHEHDEIGVLVKVANQQFVSMATEIEQRRTAENRLTQYLNELEDIVSARTNELKASNSSLSLSNQELEQARSRAL DMAQARAAFLANMSHEIRTPLNGMLGMIALALDNPLPSEQRQQLAIAHDSGKVLVELLNDILDLSKFDAGQLELERIAFDMGSMVEDTANLLSQNTAQSV ELTCLIARDFPSTVLGDPTRVRQIVSNLLSNALKFTRFGRVDIRLVTIVGGVRLEVRDTGIGIPEEAQARIFQPFTQAGAGITRQYGGTGLGLALTRNLC KAMQGHLHIRSEPGFGSCFTAELPLPVHTEAIPPTPLHGRVAALSAAGSGLNELLQNLLPAWGLAYQRHDSSATLDTTAIDLLITDDVDHLFELRPALKT PILLVTAYGNFLPNEQSLALAPLHQLARPLARNALYQTLRRTLQGHEPEHPLATPAISLEQGRARILLVEDNPVNQLVAKGMLAKLGCQVQLATQGAEAL ELLEQDEFDLILMDCNMPVMDGYEASRRIRQSGRWPHLPIVALTANAMPEERERCRAAGMSDYLAKPFRREELLALVDHWVPFNG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|