Pseudomonas sp. LAMO17WK12:I4, D885_RS0116510
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAMO17WK12:I4 D885DRAFT_scaffold00012.12_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGCAATGCCCACTCGCTGGCCATGGACCTTCACGACCAGCATGCCTACATGGCCAAGACCGGCCAGTGGCGCTTCACACCCCCCACCCACGTGGTCGCG GCCCTGCATGAAGCACTGCAGCAATACAATGAGGAAGGCGGCCTGCCGGCCCGCTACCAGCGCTACGCCAACAACTGCAAGACCCTGCTCGACGGCATGG CGGCCATCGGCCTGCGCAGCTTCCTGCCGGCCGAGATCCAGGCGCCGATCATTGTCACGTTTCATGCACCCAACGATGCCCGCTACCAGTTCAAAGACTT CTACGAGCGGGTCAAGGCCAAGGGTTTCATCCTTTACCCGGGCAAGCTGACCCAGGTCGAAACCTTCCGCGTCGGTTGCATCGGCGTGGTCGGAGCCGAC GGCATGCAAGCCGCCGTGAATGCCGTGGCCCAAGTGCTGCGGGAAATGGAAGTGCTGGACATCTGACCCTTTGCCCACCCGACTTCAGGAATTAGCGCAC
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| DNA Sequence for Gene |
>D885_RS0116510
ATGAACTACAGCAACCCTACCCAGCTGCAAGCCGCCATCCTCGACTGGGCCGGCACCGTGGTCGATTTTGGCTCCTTCGCGCCGACCCAGATCTTCGTCG AGGCGTTCGCCGAATTCGACGTGCAAGTGACCATCGAGGAAGCCCGAGGCCCGATGGGCATGGGCAAATGGGACCACATCCGCACCCTGTGCGACGTACC GGAAATTGCCGAGCGCTACCGCAAGGTGTTCGGCCGCACCCCCACCGACGATGATGTCACCGCCATCTACAACCGCTTCATGCCACTGCAGATCGAGAAG ATCGCCGTGCACTCGGCACTGATCCCCGGTGCCCTGGAAACCTTGACCGGCCTGCGCCAGAACGGCCTGAAGATCGGCTCCTGCTCGGGTTACCCGAAAG TGGTGATGGACAAGGTGGTGGAGCTGGCCGCGCAGAATGGCTACGTGGCCGACCATGTGGTAGCCACCGATGAAACCCCGAACGGTCGCCCCTGGCCAGC CCAGGCCTTGGCCAACGTGATTGCCCTTGGCATCGACGACGTAGCGGCCTGCGTGAAGGTGGATGACACCGTGCCGGGCATTCTCGAAGGCCGACGCGCC GGCATGTGGACCGTGGCCCTGGTGTGTTCGGGCAATGCCCTGGGGCTGACCTGGGAAGGCTACCGTGCACTGAGCGCCGAGAAGCTGGAAAGCGAGCGCA CGCGCATTCACACGCTGTTCGCAGGCTCCCGCCCGCACTACCTGATCGACACCATCAACGAGCTGCCCGAAGTGATCGCCGACATCAACCGGCGCCTGGC CAAGGGCGAGATGCCGCAGGCCTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGGCAAGTGGGGCCGCTTTGCGGCCCCCGTGCACGGTCTACTGCGGCAACTGCACTTGCGGCTTGGTCGAGGCAAAGATTGCCCAGCTGGACACGAAC AGTGCTGCGATCAATGGCCCGATTACGAAACCGTTGAGCCCAAAGACCGCCAGCCCACCCAACGTCGACACCAGGATCAGATAGTCCGGCATACGCGTGT CCTTGCCCACCAGGATCGGCCGCAGCAGGTTGTCCACCAGGCCGATCACCAGCACCCCGAACGCGGTCAGGATCACCCCCGGCAATATGGCCCCGGTCAG CAGGAAATACGCGGCCACCGGCGCCCAGACGATGCCAGCGCCCACTGCCGGCAGCAGCGACAGGAACGCCATCAGCACCGCCCACACCAACGCACTGGGG ATATCCAGCACCCAGAAGATGAACCCGCCCAGCGCCCCTTGGGTAATGGCCACCAGCACGTTACCTTTCACCGTCGCCCGCACCACCCGGTTGAATTTCA
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| Amino Acid Sequence |
>phosphonoacetaldehyde hydrolase
MNYSNPTQLQAAILDWAGTVVDFGSFAPTQIFVEAFAEFDVQVTIEEARGPMGMGKWDHIRTLCDVPEIAERYRKVFGRTPTDDDVTAIYNRFMPLQIEK IAVHSALIPGALETLTGLRQNGLKIGSCSGYPKVVMDKVVELAAQNGYVADHVVATDETPNGRPWPAQALANVIALGIDDVAACVKVDDTVPGILEGRRA GMWTVALVCSGNALGLTWEGYRALSAEKLESERTRIHTLFAGSRPHYLIDTINELPEVIADINRRLAKGEMPQAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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