Pseudomonas sp. LAMO17WK12:I4, D885_RS0108530
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAMO17WK12:I4 D885DRAFT_scaffold00004.4_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAAGGTGCTCGGTCGCAGCGAAGCGGAAGCGACCAAGAAGGGCCTGGCCCTGCTCGACCGCGTCGGCCTCGGTGCCCACGCCAAGAAGCACCCCGGCCAG CTTTCCGGTGGCCAGCAGCAGCGTGTGGCCATCGCCCGCGCCCTGTCGATGGACCCGATCGTCATGCTGTTCGACGAACCGACCTCGGCGCTGGACCCGG AAATGGTCAATGAAGTACTGGACGTCATGGTCGAGCTGGCCCACGAAGGCATGACCATGATGTGCGTGACCCACGAAATGGGCTTCGCCCGCAAAGTGGC CAACCGCGTCATCTTCATGGACAAGGGCAACATCATCGAGGACTGCCAGAAGGAAGACTTCTTCGGCAACCCGTCGGCCCGCCACGAGCGTACCCAGCAC TTCCTCAGCAAGATCCTGCAACACTGATTTTGCTTCACAGAACCGGTCGGCGCCGCTGCCCTTTCGGGCAGTTGGCGCTGGTCGTGACAAGGCCACTGTG
|
|
| DNA Sequence for Gene |
>D885_RS0108530
ATGAAATGCGACCCTTCGCTTCTTCTCCCTGCCAAGCCTGCCGTGAATTCCCGCCTGCTCCGCCAATTGCTGTTGCCGCCCCTGATCATCCTGCTGATGG TCGGCCTGGGAATGGCTGGCTACCTGATCAGCGAAAGCAACGGCATTCGCACCCTCAGCGAAAACGGTGAGCGCCAGCTGGAGCTGCACGCGCGCACGGT CGAAAGCGAAATCAGCAAGTACACCTATCTGCCGAGCCTGCTGGAGCTGGAAGACAGCGTCTCGCACCTGCTCACCGACCCGGACGGCGGCTCACGGCAA ACGGTAAACGAATACCTTGAGGGCCTGAACCGGCGCAGCCGCAGCCGGGCCATCTTCGTTCTCGATACCAATGGCCGGGTACAGGCCACCAGCAACTGGC GCGACGCCGACTCGTTCCTGGGTGAAGACCTGTCGTTCCGCGCCTACTTCCAGACAGCCGTGCGCGGTGAGCCTGGGCGTTTCTATGGCATCGGCAGCAC CACCGGCGAGGCTGGCTACTACCTGGCTCATGGCCTGGAGGAGCACGGCAAGATCATCGGCGTGGCCGTGATCAAGGTGCGCCTGGACACGCTCGAGGAG CGCTGGCAACGTGCCCGTCTGGAGGCGTTCGTCAGTGACGAGAACGGCATCATCATCCTTTCCAGCGACCCGGCCCGACGCCTGAAATCGGTGCGCCCGC TGACCCCGCAAATCAAGGAGCGCCTGGCGCGCAGCCTGCAATACTACTGGTGGCCGCTGAACGAGTTGCAGCCACTGGCCCGGGAAACCCTGGCCGATGG CGTGGAAAAACTGACCTTCCCGGCCAACAGCGAAACCGCAAAAGGCAAACCCCACGAGGTTGCCTACCTGGCGCAGACCCGTCGCCTGGTGGATACACCC TGGCATTTCACCCTGCTGACCCCGCTGCAGGACCTGCGCCGCGAGTCCATGGTGCAGGGCATCCTGGTGGGCGTGGCGTTCGCCTTGCTGGCGATCCTCG GCATCGCCTGGAACGAGCGACGCAAGGTCATCGCCACCCGCCTGGCAGCCCGTGAAGCCCTTGAGGAAGCGAATAGCCAGCTGGAGCGGCGGATTGCCGA GCGCACCGCCGACCTGCGTGCCAGCAACGAACGCCTGAAGGGGCAAATTCGCGAGCGCCGGCATGCCGAGCAAACCTTGCGCCACGCCCAGGATGAGTTG GTGCAGGCCGGTAAGCTGGCGGCCATCGGGCAAATGTCCACCAGTATCGCCCATGAGCTGAACCAGCCGCTGGCCGCGTTGCGCACCTTGTCTGGCAACA CGGTGCGTTTCCTCGAACGTGGGGCACTGGAAACCGCCAGCACCAACCTGCGCACCATGAACGACCTGATTGACCGCATGGGCCGCATCACCGCCAGCCT GCGCTCCTTCGCCCGGCGCGGCGATGACAGCGGCCAGGCCTCGCTGGCCAAGGCGGTGGAGGCGACCTTGCAAGTATTGGCCAACCGCATCAGCGCCTGC CATTTGCAGTTGCACCACCAGTTCGACGACCAGCAGCTGGCTATCGACCAGACGCGCCTCGAACAGATTCTGGTCAACCTGATCGGCAACGCGCTTGATG CCATGGCCGCGCAACCGCTGCCCGAGCTATGGCTGGAAGGCGAACTGCAGGGCGACAAGTACCGCTTGCAGGTGCGCGACAATGGCCACGGCATCGATGC CGAGGCGCGCAAGCACCTGTTCGAACCTTTCTTCACCACCAAACCGGGCGAACATGGCCTGGGCCTGGGCCTGACCTTGTCGGCGAGCCTTGCCGCCGCC GCCAAGGGCAGCCTCAACGTCGAGCACCCCGCCACTGGCGGCACGGCCTTCGTCCTGGCCTTGCCCCTGGTTTCTCCCCCTAGCGAATCGGCAGAGCACC CATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACCAAGCGCCTCTTACCGTACTGATCGTCGAAGACGACCCGCATGTGCTGCTCGGCTGCCAGCAGGCGCTGGCGCTGGAAGATATCGCCTGCGAAGGCGT GGGCAGCGCCGAACAGGCGCTGGAACGCATCGGCGACGATTTCGCCGGCATTGTCGTCAGTGACATCCGCCTGCCGGGCATTGACGGCCTGGAACTGCTC AACCGCCTGAAGGCCCGTGATCGCAGCCTGCCGGTGGTGCTGATCACCGGCCATGGCGATATCGACATGGCCGTCGGCGCCATGCGTAACGGCGCCTACG ACTTCATGGAAAAACCGTTCTCCCCCGAGCGCCTGGTCGATGTGGTGCGCCGCGCACTGGAGCAACGCGGGCTGTCGCGAGAAGTGGTGGCCCTACGGCG CCAACTGGCCGGACAGAGCAGCCTTGAGGGCCGCATCATTGGCCGTTCCCCCGCCATGGAGCACTTGCGCGAACTGATCGCCAACGTCGCCGATACCTCA
|
|
| Amino Acid Sequence |
>histidine kinase
MKCDPSLLLPAKPAVNSRLLRQLLLPPLIILLMVGLGMAGYLISESNGIRTLSENGERQLELHARTVESEISKYTYLPSLLELEDSVSHLLTDPDGGSRQ TVNEYLEGLNRRSRSRAIFVLDTNGRVQATSNWRDADSFLGEDLSFRAYFQTAVRGEPGRFYGIGSTTGEAGYYLAHGLEEHGKIIGVAVIKVRLDTLEE RWQRARLEAFVSDENGIIILSSDPARRLKSVRPLTPQIKERLARSLQYYWWPLNELQPLARETLADGVEKLTFPANSETAKGKPHEVAYLAQTRRLVDTP WHFTLLTPLQDLRRESMVQGILVGVAFALLAILGIAWNERRKVIATRLAAREALEEANSQLERRIAERTADLRASNERLKGQIRERRHAEQTLRHAQDEL VQAGKLAAIGQMSTSIAHELNQPLAALRTLSGNTVRFLERGALETASTNLRTMNDLIDRMGRITASLRSFARRGDDSGQASLAKAVEATLQVLANRISAC HLQLHHQFDDQQLAIDQTRLEQILVNLIGNALDAMAAQPLPELWLEGELQGDKYRLQVRDNGHGIDAEARKHLFEPFFTTKPGEHGLGLGLTLSASLAAA AKGSLNVEHPATGGTAFVLALPLVSPPSESAEHP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|