Pseudomonas sp. LAMO17WK12:I4, D885_RS0102025 (proY)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAMO17WK12:I4 D885DRAFT_scaffold00001.1_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGAAAACAAGGCCCTTTCGCACCCACACAGCGTCGACAGCCTGCCGACTTCGGCCAACCAGGAGGACCACGTGTCGATGGCCCCGGCTGCCGGCAAGCG CCTGTGGGAAATGGCTGAAAACACCCGTGGCGTACTGGCCATCGAATGGCTGGGCGCCTGCCAGGGCCTGGACCTGCGCAAAGGCCTGAAGACTTCCGCC AAGCTGGAGCAGGCGCGCAAGGCGCTGCGCAGCGAAGTGCCGCACTACGACCGTGACCGTTTCTTCGCGCCAGACATCGAAAAGGCCGTGGAACTGTTGG CCAAGGGTAGCCTGACCGGCTTGCTGCCGGCGGGTGTGCTGCCAAGCCTGTAATGCCCCTAGGGCCGCGTTGCGGCCCATCGCGAGCAAGCTCGCTCCTA TAAAGGCAACGCGTTCCCTTGTAGGAGCGAGCTTGCTCGCGATTGGGTTGCATGGCGGCCCCCTGATCTCACGACCACAAAAACAATTTAAGGACGTGAC
|
|
| DNA Sequence for Gene |
>D885_RS0102025
|proY
ATGCAACAAGCTCCAGGTCTCAAGCGCGGGCTAAGTGCCCGCCACATCCGTTTCATGGCCCTCGGTTCCGCCATCGGCACCGGGCTGTTCTACGGCTCTG CCTCGGCCATCCAGATGGCCGGCCCGGCCGTGCTGCTGGCCTACCTGATCGGCGGCGCTGCCGTGTTCATGGTCATGCGCGCCCTCGGCGAAATGGCCGT GCATAACCCGGTGGCCGGCTCCTTCGGCCACTACGCCAGCACCTACCTCGGCCCCATGGCCGGCTTCATCCTCGGCTGGACCTACGCCTTCGAAATGGTC ATCGTCGCCATCGCCGACGTCACCGCCTTCGGTATCTACATGGGCTTCTGGTTCCCGGAAGTGGCCCGCTGGATCTGGGTGCTGGGCATCGTCTTCCTGA TCGGCGGCCTCAACCTGTGCAACGTCAAGGTGTTCGGCGAAATGGAGTTCTGGCTGTCGCTGCTCAAGGTCGGCGCTATCGTGGCGATGATCCTGGCCGG CCTCGGCATCATGGCCTTCGGCTTCAGCCAGGTGGGTACCGGGCATGCCGTCGGCGTCAGCAACCTGTTCGACCACGGCGGCTTCATGCCTAACGGCGTG GGTGGGCTGATCGCGTCCTTTGCCGTGGTGATGTTCGCCTTCGGCGGCATCGAGATCATTGGCGTCACCGCCGGTGAGGCCAAAGATCCGCAGCGCGTCA TCCCCAAGGCGATCAACGCCGTGCCGCTGCGCATCCTGCTGTTCTACGTACTCACCCTGTTCGTGCTGATGTGCCTGTACCCATGGCCGCAGATCGGCAG CCAGGGCAGCCCGTTCGTGCAGATCTTCAGCAACCTGGGCATTGGCTCTGCCGCCGCTGTGCTGAACATCGTGGTGATTTCTGCCGCCATCTCGGCCATC AACAGCGACATCTTCGGCGCCGGCCGCATGATGTACGGCCTGGCCCACCAAGGCCATGCGCCACGCAGCTTCGGCAAACTGTCGAAGCATGGCGTGCCGT GGATGACCGTGGTGGTGATGGGCGCTGCACTGCTGATTGGCGTGCTGCTCAACTACCTGATCCCGGAGAACGTGTTCCTGCTCATCGCTTCCATTGCCAC CTTCGCCACTGTATGGGTGTGGCTGATGATCCTGCTCACCCAGGTGGCCATGCGCCGCAGCATGAGCCGTGAGGAAGTGGCCCAACTCAAGTTCCCGGTG CCGTTCTGGCCCTACGGCCCGGCCATGGCCATTGCGTTCATGGTGTTCATCTTTGGTGTGCTCGGCTACTTCCCGGACACCCAGGCGGCACTGATCGTCG GCGTGGTCTGGGTGGTGTTCCTGGTGGCGTCCTACCTGCTGTGGTGCAAGCCGCGTGCAGGGCAGGGCAGGCCGGCAGCAGAACCCGTAGAACTGCACCG TTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TAAAGGAGATTGTGCATGAGAACCCTCTGGCAGCATTGCCATGTGGCTACCATGGCCGAGGGCCGTTATTCGGCCATCGAGGACGCGGCCATCGTCACCC GTGCCGGGCTGATCGAGTGGATCGGCCCACGCGCCGAGCTGGCGCCGGTCGACGCTGACCGCACGGTGGACCTGGGCGGCGCCTGGGTCACCCCGGGGCT GATCGACTGCCACACCCACGCGGTGTTCGGTGGCAACCGTAGCGGTGAGTTCGAGCAGCGCCTGCAGGGCGTGAGCTATGCCGAAATTGCTGCCCAGGGC GGTGGTATCGCCAGCACCGTGCGGGCCACCCGCGCGGCCAGCGAGGACGAACTGTTCGCCAGTGCTCGTCAGCGGGTTCAGGCGCTGATGCGCGATGGCG TGACCACGATCGAGGTCAAGTCTGGCTACGGCCTGGACCTGGCCAACGAACGCAAGATGCTGCGCGTGGCCCGGCGCCTGGCGGACGAACTGCCGCTGGC
|
|
| Amino Acid Sequence |
>permease
MQQAPGLKRGLSARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIGGAAVFMVMRALGEMAVHNPVAGSFGHYASTYLGPMAGFILGWTYAFEMV IVAIADVTAFGIYMGFWFPEVARWIWVLGIVFLIGGLNLCNVKVFGEMEFWLSLLKVGAIVAMILAGLGIMAFGFSQVGTGHAVGVSNLFDHGGFMPNGV GGLIASFAVVMFAFGGIEIIGVTAGEAKDPQRVIPKAINAVPLRILLFYVLTLFVLMCLYPWPQIGSQGSPFVQIFSNLGIGSAAAVLNIVVISAAISAI NSDIFGAGRMMYGLAHQGHAPRSFGKLSKHGVPWMTVVVMGAALLIGVLLNYLIPENVFLLIASIATFATVWVWLMILLTQVAMRRSMSREEVAQLKFPV PFWPYGPAMAIAFMVFIFGVLGYFPDTQAALIVGVVWVVFLVASYLLWCKPRAGQGRPAAEPVELHR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|