Pseudomonas sp. LAMO17WK12:I2, D883_RS0127470
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF02706
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Biological Process | GO:0009103 | lipopolysaccharide biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF02706
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR32309 | TYROSINE-PROTEIN KINASE | - | - | 2 | 410 | 3.6E-23 |
| SUPERFAMILY | SSF160355 | Bacterial polysaccharide co-polymerase-like | - | - | 212 | 324 | 5.23E-13 |
| SUPERFAMILY | SSF160355 | Bacterial polysaccharide co-polymerase-like | - | - | 70 | 213 | 5.1E-12 |
| Gene3D | G3DSA:3.30.1890.10 | - | - | - | 38 | 211 | 5.5E-10 |
| Gene3D | G3DSA:3.30.1890.10 | - | - | - | 212 | 332 | 2.5E-19 |
| Coils | Coil | Coil | - | - | 208 | 235 | - |
| Coils | Coil | Coil | - | - | 175 | 202 | - |
| Pfam | PF02706 | Chain length determinant protein | IPR003856 | Polysaccharide chain length determinant N-terminal domain | 4 | 69 | 1.8E-13 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.