Pseudomonas sp. LAMO17WK12:I2, D883_RS0109115
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAMO17WK12:I2 D883DRAFT_scaffold00005.5_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTTCGGCAGTGATGAGATGGTGAATCGGGCGGTGGCCAGCCTGATTGAGGAAGCACGGGAAGACGATGCCTGGCTGGACCTGGCGCAGGCCCGCGCCGAT GGGCCCTTGCTGGTGGAGCGATTGCACCGTTTGGTGGGCAGCCTGGCCTTCGTCGGCGGAGTCGACCTGGAGCGTTGCGGCGAGCAGTTGATTGCGCGGG TCCAGGCCGATGGTGTGGTGGCGAATACGCCGCAGTTGCAAGCCTTCCAGCGCAACTTGCGGGGGTACATGGCTTATCTGAGCCGGTTATGAGTCTTCGG GACTCAAAGGTTTGTAGGAGGTTATTACTGTGGGTTGGAAGTTTTGGGTGTAGGTAATTTCTTTTTATTTTGTAGGCGTAAAGTTGCCATCTATCAAACG CTGGGCGCGGTCCGGAACCGGCTGCATCGAGTGGTTGTTGAGACAAGAGGACACAGGTATTTTTGCGCCAATTCCAAGTTGCCATCATTCGTGGGTATTT
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| DNA Sequence for Gene |
>D883_RS0109115
ATGTTGCGTGTAATTATTGCCGACGATCATCCCATTGTGCGCATCGGGCAACGGGTGGTGATTGAGGCGGGCGGTAGATGCACAGTGGTCGGTGAGGCCG ACGGTCCCGATGAATTGCTCAAGTTGCTGGGCAGCGTGGCGTGTGACGTGCTGGTGACTGACTTCGCCATGCCCGGCGGCCAGCAGGCCGACGGCTACGG ACTGCTGGGGCTGTTGCGGCGCCAGTACCCGACTTTGCCGGTGATTCTGGTCACCATGTTCGCCAATGTGGCGACGCTGCGTGCGTCCTTTGCCCACGGG GCACGGGCGATTGTCGCCAAGAGCGCCTCGGCCCGGGAGCTGCCCACCGCTATCGCTACAGTGACCAGGGGCGAGACGTTTGTCAGTGAATGCCTGCGCG CGCAGTTGGTGGAGGCGGGCACCGGCGATCAGTTGCAACAGCCGCAGCTGTCCAGCAAGGAGCGCGAAGTGGTCAGGATGCTGGCCAGCGGCATGACCGT CAGCCAGATTGCGGCCCGGGTCAATCGCAGTATTTCCACGATCAGCAAGCAGAAAAGCACGGCCATGAGCCGGCTGTGCATCTCCACCGATGTGGACCTG TTTGCCTACGCCCGCAGCTGCGGCATGGTGCCGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCCGGGTGGGGCATTCCCGGTGTAAATGGCGATAGAGTTTTATCGGCGCCCGGACTATCTTGGACGGCTTACAACCCCTGGTCTGGAACCTGCCCATGA GCGACGCACACAACGCCCTGATCACCGAGTTCTACAGCGCTTTCCAGCGGCTGGATGCCGAGGCCATGGCGGCCTGCTACACCGAGGATGTGCTGTTCAG CGACCCGGCCTTCGGTGAGTTGCGCGGGCGTAACGCCGGCGATATGTGGCGCATGCTCACCACCCGGGCCAAGGATTTCTCCCTGACGTTCGACCATGTG CGCAGCGATGAAACCACCGGCAGCGCGCATTGGGTCGCGACCTACCTGTTCAGCGCCACCGGTAACACGGTGGTCAACGATATCGGCGCGCGGTTTGTGT TTCGTGATGGCAAGATCTGCGAACACCACGACCACTTCGATCTGTGGCGCTGGTCGCGCCAGGCCCTGGGCCTCAAGGGCCTGTTGCTGGGCTGGTCGCC
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| Amino Acid Sequence |
>response regulator receiver protein
MLRVIIADDHPIVRIGQRVVIEAGGRCTVVGEADGPDELLKLLGSVACDVLVTDFAMPGGQQADGYGLLGLLRRQYPTLPVILVTMFANVATLRASFAHG ARAIVAKSASARELPTAIATVTRGETFVSECLRAQLVEAGTGDQLQQPQLSSKEREVVRMLASGMTVSQIAARVNRSISTISKQKSTAMSRLCISTDVDL FAYARSCGMVP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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