Pseudomonas sp. LAMO17WK12:I2, D883_RS0108790
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR30069 | TONB-DEPENDENT OUTER MEMBRANE RECEPTOR | IPR039426 | TonB-dependent receptor-like | 40 | 672 | 2.3E-75 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 205 | 239 | - |
| SUPERFAMILY | SSF56935 | Porins | - | - | 41 | 672 | 1.5E-94 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 205 | 219 | - |
| Gene3D | G3DSA:2.40.170.20 | - | IPR036942 | TonB-dependent receptor-like, beta-barrel domain superfamily | 158 | 672 | 2.2E-70 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 64 | 83 | - |
| Gene3D | G3DSA:2.170.130.10 | - | IPR037066 | TonB-dependent receptor, plug domain superfamily | 38 | 154 | 6.1E-29 |
| CDD | cd01347 | ligand_gated_channel | - | - | 45 | 672 | 3.62428E-60 |
| Pfam | PF07715 | TonB-dependent Receptor Plug Domain | IPR012910 | TonB-dependent receptor, plug domain | 41 | 144 | 5.0E-20 |
| Pfam | PF00593 | TonB dependent receptor | IPR000531 | TonB-dependent receptor-like, beta-barrel | 203 | 670 | 1.5E-46 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.