Pseudomonas sp. LAMO17WK12:I2, D883_RS0107365
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAMO17WK12:I2 D883DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACCGCCGGGATGCACGCCAAGACCGCCAGTTACATCATGACCGGCGCGCTGTTCCTGTACATGTGCATGCAGCCGCTGTTCGGCATGCTGGCCGACAAG ATCGGCCGGCGTAACTCGATGCTGTGGTTCGGCGCGTTGGGCACACTGTGCACGGTGCCGATCCTGCTCAGCTTGAAAACCGTCAGCAGTCCGTTCCTGG CGTTTGTGCTGATCACCCTGGCCCTGGCGATTGTCAGCTTCTACACCTCGATCAGCGGCCTGGTGAAGGCGGAAATGTTCCCGCCACAAGTGCGCGCCCT GGGCGTGGGCCTGGCCTATGCGGTGGCCAACGCGATCTTCGGCGGCTCGGCGGAATACGTGGCCCTGGGCCTCAAATCCATGGGCATGGAAAACACCTTC TATTGGTATGTCACCGGCATGATGGCGGTGGCCTTCCTGTTCAGCTTGCGTTTGCCGAAACAGGCGGCGTACCTGCATCACGATTTGTAAGGGATGAGTT
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| DNA Sequence for Gene |
>D883_RS0107365
ATGACACTGCGCACGAGCAATCAACTGTTCGACGCTTACTTCACCGCTGACAGCATGGCCGAGGTGTTCTGCGACCAGGGACGCCTGCAGGGCATGCTCG ATTTCGAAGCCGCGCTCGCCCGGGCGCAGGCCCGGGTCGGGTTGATCCCGCAGGCGTCCGTGGCGCCGATTGCCCAGGCCTGCCTGGCGTCGCTGTACGA CGTGGACGCCCTCGGCGTGGCGATTGCCACGGCGGGGAATTCCGCGATTCCGCTGGTGAAGGCCCTGGGCAAGTTGATTGCCAGCGGGGATGCCGGGGCC GAACGTTATGTGCACCTGGGCGCGACCAGCCAGGACGTGATGGACACCGGGCTGGTGCTGCAACTGCGCCGGGCCCTGGGGTTGATCGAAACGGACCTGG CGCGTCTGGGCGACGTGCTGGCCGCCCAGGCCCAGCGTTATGCGACGACGCCGTTGGCCGGGCGTACCTGGTTACAGCACGCGACGCCGGTCACCCTGGG GATGAAGATTGCCGGTTGGCTGGGCGCGGTGACGCGCAGTCGCCAGCGTTTGAAAGAACTGCAACCGCGTTTGCTGGTGCTGCAATTCGGCGGCGCGTCC GGGACGTTGGCGGCACTCGGCGAACACGCCATGCCGGTGGCCGAGGCGCTGGCGGCAGAGTTGAAGCTGAGCTTGCCTGAACAACCCTGGCACACCCAAC GGGATCGTCTGGTGGAGTTCGCCTCCGTCCTGGGCCTGATCGCCGGCAGCCTCGGCAAACTGGGCCGCGATATCAGCCTGCTGATGCAAACTGAAGCGGC CGAAGTGTTCGAGCCGTCGGCGCCCGGCAAGGGCGGTTCGTCGACCATGCCGCACAAACGCAACCCGGTGGGCGCGGCTGTGCTGATCAGCACCGCCACG CGCGTGCCCGGCCTGGTGGCGACGATGTTCAACGCCATGCCCCAGGAACATGAACGCAGCCTGGGCCTGTGGCACGCCGAATGGGAAACCTTGCCGGAGA TTTGCCGCCTGGTGTCCGGGGCCTTGAAACAAGCGCTGCTGGTGAGCGAAGGGTTGGAAGTCGACCCCGGACGTATGGCCCACAACCTCGACCTGACCCA AGGCCTGGTGCTGGCCGAAGCCGTCAGCATCGTGCTGGCTCAACGCCTGGGCCGGGAAACCGCGCACCACCTGCTGGAGCAATGCTGCAAACGCGCCGTC GCAGAAGGGCGCCACTTGCGCGCGGTGCTGGCGGACGAACCGCAGGTCACCGCCGAGTTGTCCGCCCCTGAGTTGGACCGCCTGCTCGACCCGGCCCACT ACCTGGGCCAGGCGCCCACCTGGGTCACTCGCGCTGTCACCGAACACTTTGCATTGACCGCCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGAACGCTGTGGCTTTCGTACAACTCGCCGAGGGCGAACTGCATTACCAACTCGATGGCCCCGTGGACGCACCGGTGCTGGTGCTGTCCAACTCGCTG GGTACCGACCTGCATATGTGGGACATCCAGATCCCGGCGTTGACCGAGCATTTCCGGGTGTTGCGTTTCGACACCCGTGGCCACGGCAAATCCCTGGTGA CCGAGGGACCGTACAGCATCGAGCAGTTGGGCCACGACGTGATCGCACTGCTGGATGCGCTGGATATTCAGCGTGCGCACTTTTGCGGGCTGTCCATGGG CGGCTTGATCGGCCAATGGCTGGGGATTAATGCCGGTGAGCGCCTGCAGCGCCTGGTGGTGTGCAACACCGCCGCCAAAATCGGCACGCCGGAGATCTGG AACCCACGGATCGAGATGGTCCAGCGTGATGGCGCGGCGGCCATGGTGGCCTTGCGCGATGCGTCGATTGCGCGTTGGTTCACCGCCGATTTTGCGGCAG
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| Amino Acid Sequence |
>3-carboxy-cis,cis-muconate cycloisomerase
MTLRTSNQLFDAYFTADSMAEVFCDQGRLQGMLDFEAALARAQARVGLIPQASVAPIAQACLASLYDVDALGVAIATAGNSAIPLVKALGKLIASGDAGA ERYVHLGATSQDVMDTGLVLQLRRALGLIETDLARLGDVLAAQAQRYATTPLAGRTWLQHATPVTLGMKIAGWLGAVTRSRQRLKELQPRLLVLQFGGAS GTLAALGEHAMPVAEALAAELKLSLPEQPWHTQRDRLVEFASVLGLIAGSLGKLGRDISLLMQTEAAEVFEPSAPGKGGSSTMPHKRNPVGAAVLISTAT RVPGLVATMFNAMPQEHERSLGLWHAEWETLPEICRLVSGALKQALLVSEGLEVDPGRMAHNLDLTQGLVLAEAVSIVLAQRLGRETAHHLLEQCCKRAV AEGRHLRAVLADEPQVTAELSAPELDRLLDPAHYLGQAPTWVTRAVTEHFALTA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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