Pseudomonas sp. LAMO17WK12:I2, D883_RS0106325
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAMO17WK12:I2 D883DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGACCACACGGCTGTTGTTCGAATCCAAGCGCAATGGCACCTTGCCGGAGTTTACCCCCTCCGAGGTGCTGGGCCACATCAACCGAGGCCTGATCAGCT GCAAGCTGGGCAAGCACGTGACGATGGTAGGCGGCGTGATTGATGAAGAAACCGGTCTTTTGACCTACAGCATCGGCGGTCACCTGCCGATGCCTGTTTT ATACACTCCCGACAGTGTGCGTTACCTGGAAGGGCGTGGTCTGCCCGTAGGCTTGTTCAATGAAGCTACTTACGAAGACCACATCCTGGAGCTGCCGCCG ACGTTCAGCCTGACGCTGATGTCCGACGGCATCCTGGACCTTCTTCCAGAGCCTACACTCAAAGAGAAAGAAGCCGCCTTGCCCCAGAAGGTCAAGTCGG CGGGCGGCAGCCTGGATGGCCTGCGGCAGGTTTTTGGATTGGCCACGCTAGGGGAGATGCCGGATGATATCGCCCTATTGGTGTTGAGCAGGAATCTTTG
|
|
| DNA Sequence for Gene |
>D883_RS0106325
ATGAGTACCGGAAGAATCCAATTCGCCGAGCAAGACGGGACCTTCGTCCTGAAGTTTGTCGGTGAAGTGCGCCTGACCTTGTGTTCGGCGCTGGATGCGA CGATTGAGCGGATTTTCACGGCGTTGAATTTCTCGGCGATCGTGATCGATCTGACCGAAACCCGCAGCATCGATAGCACCACCCTTGGGCTGTTGGCCAA GTTGTCCATTCTGTCCCGGCAGAAGGTCGGCCTGTTGCCGACCGTCGTCACCACCCACGAAGACATCACCCGTCTGTTGCAGTCCATGGGCTTCGACCAG GTGTTCAACATCGTTGATCGCCCGATCCCTTGCCCGGAATGCCTCACCGACCTGCCGTCCCAGGATCAGTCCGAGGAAGTGGTGCGGGTCAAGGTGCTGG AAGCGCACAAGATCCTGATGGGCCTCAACGAGTCCAACCGCGAAGCCTTCCACGACCTCGTCAACGCCCTCGAGCGTCACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCCCAGGGATCGCCTGCTACTTTAGGGACAGCAGAGCAAAAAAGGGCGGTACCCTCACAGGTACCGCCCTTTTTGTCGCCTGCGCCGTTTACAGCTTGGC GGACAACAGTGCCTCAAGCTTCTCCTGGTCCCGGGCAAACTGACGAATCCCCTCCGCCAGCTTCTCAGTCGCCATCGCATCCTCGTTGGACTCCCAACGG AACTGCGCTTCAGTCAGATGCACTCGCGCTTCTCCGGCGTGCCCTGGCGACAACTTGCGTTCCAGCTTGCCGTCATCCGCCGCCAGCTTCTCCAGCAGGT CCGGGCTGATGGTCAGGCGATCACAGCCGGCCAGCTCTTCAATCTGGCTCAGGTTGCGGAAACTCGCACCCATCACCACGGTCTTGTAGCCATTAGCCTT GTAGTAGTTGTAGATGCGTGTCACCGACTGCACGCCCGGATCATCAGCGCCGGTGTAGTCGTTGCCATTGGCTTTCTTGTACCAGTCGTAGATACGGCCT
|
|
| Amino Acid Sequence |
>anti-anti-sigma factor
MSTGRIQFAEQDGTFVLKFVGEVRLTLCSALDATIERIFTALNFSAIVIDLTETRSIDSTTLGLLAKLSILSRQKVGLLPTVVTTHEDITRLLQSMGFDQ VFNIVDRPIPCPECLTDLPSQDQSEEVVRVKVLEAHKILMGLNESNREAFHDLVNALERH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|