Pseudomonas sp. URMO17WK12:I12, D882_RS0127510

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. URMO17WK12:I12 D882DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCGAACCGGACGGCATCGTCAGCATCGTCCTGGGTCAGCACCACATCCGCGCGACCACCGGCGAGTTCACCTTCACCTCGAAACTGGTCGACGGCAAAT TCCCGGATTACGAGCGTGTTCTGCCAAAAGGCGGAGACAAGCTGGTACTCGGCGACCGTCAGGCGCTGCGTGAAGCTTTCAGCCGTACTGCGATTCTGTC CAACGAGAAGTACCGTGGCATCCGTCTGCAACTGGCTAACGGTCAGCTGAAAATCCAGGCGAACAACCCGGAGCAGGAAGAAGCGGAAGAAGAAGTGGGC GTTGAATACAACGGCGGCAATCTCGAAATCGGCTTCAACGTCAGCTATCTGCTCGACGTACTGGGCGTGATGACCACTGAGCAAGTTCGCCTGATCCTGT CCGATTCCAACAGCAGTGCGCTGGTGCAGGAATCCGACAACGACGACTCGGCTTACGTTGTCATGCCGATGCGCCTGTAATCATGTTCAGCAGAAGCTAG
DNA Sequence for Gene
>D882_RS0127510
ATGTCGCTAAGTCGCGTCTCGGTCACCGCGGTGCGCAATTTGCACCCGGTGACCTTCTCCCCCTCCCCCCGAATCAACATTCTTTACGGCGCCAACGGCA GCGGCAAAACCAGTGTTCTGGAAGCCATTCATCTGCTGGGGCTTGCCCGTTCGTTTCGTAGCAGCCGTCTGTTGCCGGTCATCCAGTACGAGCAATTGGC GTGTACGGTGTTTGGCCAGGTTGAATTGGCTGAGGGTGGACACAGCGCGTTAGGTATTTCACGCGACCGTCAGGGCGAATTTCAGATCCGCATCGATGGC CAGAACGCCCGAAGCGCGGCGCAACTGGCGGAGATCCTGCCACTCCAGCTGATCAACCCTGACAGTTTCCGCTTGCTTGAAGGCGCGCCGAAGATTCGCC GACAGTTTCTCGACTGGGGCGTATTCCATGTGGAACCGCGATTCATGTCCACCTGGCAGCGCTTGCAGAAGGCGCTGCGCCAGAGAAACTCTTGGCTGCG ACATGGTACACTTGACGCCGTTTCGCAAGCGGTTTGGGACAGGGAACTGTGCCAGGCCAGCGCTGAAATCGATGAATACCGCCGCGCTTACATCAAAGCC TTGAAACCAGTCTTTGAACAGACCTTGAGCGAACTGGTCGAGCTTGAAGGCTTGACCCTCAGCTATTACCGAGGCTGGGACAAAGACCGCGAACTGAGTG CCGTACTCGCTGGGTCCCTTCAACGGGACCAGCAAATGGGTCACACCCAGGCCGGACCACAACGCGCTGATTTGCGTCTCAGACTGGGCGCACATAATGC CGCGGACATCTTGTCCCGGGGTCAGCAGAAATTGGTGGTCTGTGCATTGCGGATTGCCCAAGGACACCTGGTGAGCCAGGCCCGACGCGGACAGTGTATT TATCTGGTGGATGACTTGCCGTCCGAATTGGACGAGCACCACCGACGCGCGCTTTGCCGCTTGCTGGAAGACTTACGCTGCCAGGTCTTTATCACCTGTG TAGATCACGAATTATTGAGGGAAGGCTGGCAGACGGAAACGCCAGTCGCTTTGTTCCACGTGGAACAGGGCCGTATCACCCAGACCCACGACCATCGGGA GTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGGCATTGAGCGAAGAAAATACGTACGACTCAACGAGCATTAAAGTGCTGAAAGGCCTGGATGCCGTACGCAAACGTCCCGGTATGTACATTGGTGACAC CGACGATGGCAGCGGTCTGCACCACATGGTGTTCGAAGTGGTCGATAACTCGATCGACGAAGCTCTCGCCGGCCACTGCGACGACATCAGCATCATCATT CACCCGGATGAGTCCATCACCGTTCGCGACAACGGCCGTGGCATCCCGGTAGACGTGCACAAAGAAGAAGGCGTTTCGGCAGCCGAGGTCATCATGACCG TGCTGCACGCCGGCGGTAAGTTCGACGACAACTCCTACAAAGTATCCGGCGGTCTGCACGGTGTAGGTGTGTCGGTAGTGAACGCACTGTCCAAAGAACT GATCCTGACCGTTCGCCGCAGCGGCAAGATCTGGGAACAGACTTACGTCCACGGTGTTCCGCAAGAGCCGATGAAAATCGTTGGCGAGAGCGAAACCACG
Amino Acid Sequence
>recombinase RecF
MSLSRVSVTAVRNLHPVTFSPSPRINILYGANGSGKTSVLEAIHLLGLARSFRSSRLLPVIQYEQLACTVFGQVELAEGGHSALGISRDRQGEFQIRIDG QNARSAAQLAEILPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFMSTWQRLQKALRQRNSWLRHGTLDAVSQAVWDRELCQASAEIDEYRRAYIKA LKPVFEQTLSELVELEGLTLSYYRGWDKDRELSAVLAGSLQRDQQMGHTQAGPQRADLRLRLGAHNAADILSRGQQKLVVCALRIAQGHLVSQARRGQCI YLVDDLPSELDEHHRRALCRLLEDLRCQVFITCVDHELLREGWQTETPVALFHVEQGRITQTHDHRE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site