Pseudomonas sp. URMO17WK12:I12, D882_RS0127490
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I12 D882DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCAAGCGGGCGGCATCGAATGCTACCCGGTGACCGGCGAGATCACCTACGGTCTGGAGCGTCTGGCCATGTACCTGCAAGGCGTAGACTCGGTCTACG ACCTGGTCTGGGCTGACGGTCCGTTCGGCAAAGTGACCTATGGCGACGTGTTCCACCAGAACGAAGTGGAGCAGTCGACCTACAACTTCGAACACGCCAA CGTCGAGAAGCTGTTCGAACTGTTCGACTTCTATGAAAGCGAAGCCAAGCGCCTGATCGAACTCGACCAGCCGCTGCCGTTGCCGAGCTACGAAATGGTG TTGAAGGCTTCCCATACCTTCAACCTGCTGGATGCGCGCCGGGCAATTTCGGTGACTGCGCGTCAGCAATACATTCTGCGTGTACGCACCCTGGCGCGTT CCGTTGCGCAAGCCTACCTGCTGGCTCGCGCCAAGCTGGGCTTCCCGATGGCGACCCCGGACCTGCGTGATGAAGTACTGGCCAAGCTGGAGGCTGCACA
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| DNA Sequence for Gene |
>D882_RS0127490
ATGAGTGCTCTGGATTTTCTGGTTGAACTGGGCACTGAAGAACTGCCACCCAAAGCCCTGAACACCCTGGCCGAGGCGTTCCTCGCCGGTATCGACAAGG GCCTGCAAGCTGCCGGCCTGAACTACGAGACCAAAACGGTCTATGCCGCGCCGCGTCGCCTGGCCGTGCTGATCACCTCGCTGGCCACCCAGCAACCGGA TCGCAGCATCAACCTCGATGGCCCGCCACGTCAGGCGGCGTTCGATGCCGAAGGCAACCCGACCCAGGCAGCACTGGGTTTTGCCAAGAAGTGCGGTGTC GAGCTGAGCGAAATCGATCAGAGCGGTCCGAAACTGCGTTACAGCCAAAGCATCGCCGGCAAGCCGACTGCGAGCCTGCTGCCGACCATCGTCGAAGATT CGCTGAACGACCTGCCGATCCCGAAACGCATGCGTTGGGGCGCTCGCAAGGAAGAATTCGTTCGTCCGACCCAGTGGCTGGTGATGCTGCTCGGTGACGA AGTCATCGATTGCACCATCCTCGCCCAGAAGGCTGGCCGTGATTCCCGTGGTCACCGCTTCCATCACCCGCAAAACGTACGCATCACCTCGCCGGCCAAT TACCTCGCCGACTTGCGTGCCGCGTACGTCCTGGCCGATGCCAACGAACGTCGCGACATCATCAGCAAGCGCACCGAAGAACTGGCTACCCGCCAGGAAG GCACGGCGATTGTTCCACCGGCGCTGCTCGACGAAGTGACCGCGCTGGTCGAATGGCCAGTGCCGCTGGTGTGCTCGTTCGAAGAGCGTTTCCTCGATGT GCCGCAAGAAGCACTGATCACCACCATGCAGGACAACCAGAAGTATTTCTGCCTGCTGGATGCCGATGGCAAGTTGCTGCCCCGTTTCATTACCGTGGCC AACATCGAAAGCAAAGATCCGCAGCAGATCATCGCCGGTAACGAGAAAGTGGTTCGCCCACGCCTGACCGACGCCGAGTTCTTCTTCAAGCAAGACAAGA AGCAGAAACTCGAAGACTTCAACCTGCGTCTGCAAAACGTGGTGTTCCAGGAAAAACTCGGCAGCGTCTACGACAAGGCCGAACGCGTTTCCAAACTCGC TGCGTTCATCGCGCAACGCATTGGCGGCAACGCTGCATGGGCTTCCCGTGCCGGCCTGTTGTCCAAGTGCGACCTGGCGACCGAGATGGTCGGTGAGTTC CCGGAGATGCAAGGTGTCGCCGGTTACTACTACGCCCTCAATGACGGCGAGCCGGAAGAAGTCGCCCTGGCGCTGAACGAGCAGTACATGCCGCGCGGTG CCGGTGCTGAACTGCCGACCACCCTGACCGGTGCGGCCGTGGCTATCGCCGACAAGCTCGACACGCTGGTGGGTATTTTCGGTATCGGCATGCTGCCAAC GGGTAGCAAAGACCCGTACGCCTTGCGCCGTGCTGCACTCGGCGTGCTGCGTATCCTGATCGACAAGAAACTCGATCTGGACCTGAACGACGCCGTGGCT TTCGCCGTGAATGCGTTCGGTGCCAAGATCAAGGCCGCCGGCCTCAACGACGCGGTGCTGGAGTTCGTCTTCGACCGTCTGCGTGCCCGTTACGAAGACG AGGGTGTAGACGTTGCGACTTACCTGTCGGTGCGTGCCCTGAAGCCGGGTTCGGCACTGGACTTCGACCAACGTGTACAAGCGGTAGAAGCTTTCCGCAA ATTGCCGGAAGCCGCGGCCCTGGCTGCGGTGAACAAGCGCGTATCGAACTTGCTGAGCAAGGTCGAAGGCTCCGTTCCAACGGTGGTTGAAGCCAAATAC TTCGACAATGCCAACGAGTTTTCCCTGTATTCGGCGATCCAGCAGGCAGACCAGGCTGTCCAGCCGATGGCTGCTGCGCGTCAGTACAGCGAATCGCTGG CACGCCTGGCCGCCTTGCGCGAGCCGGTGGATGCGTTCTTCGAAGCGGTAATGGTCAACGCGGAAGATGCCAAGGTCCGCGCCAACCGTTATGCCTTGCT GGCGCGTCTGCGTGGGCTGTTCCTCGGCGTCGCTGATATTTCGCTGCTGAGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGGCTGCTGTTGAAACTGCTGATTCTCGATCGCGACGGGGTGATCAATTACGACTCCGACGCTTACATCAAGTCGGTGGAGGAGTGGATTCCACTCCCC GGTTCGATCGAAGCCATCGCGCAGTTGAGCAAGGCCGGCTGGACGGTAGCGGTCGCTACCAACCAGTCGGGCATCGCTCGCGGCTATTACGACATCGCCA CCCTGGACGCCATGCACGAGCGCTTGCGCGCGCTGGTGGCGGAGCAGGGCGGTGAAGTCGGCCTGATCGTCTATTGCCCGCACGGGCCGAACGACGGCTG CGATTGCCGCAAGCCGAAACCCGGGATGCTGAAAGCCATCGCCGAGCATTACAACGTGTCGCTGACCAATCTCTGGTTCGTCGGCGACAGCCTTGGTGAC CTGGAAGCCGCCAAAGCCGTCGATTCTCAGCCAGTTTTGGTAAAGACCGGGAAAGGCGAAAAGACTTTCGGCAAGACCCTACCGGTAGGCACCTTGATTT
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| Amino Acid Sequence |
>glycine-tRNA synthetase subunit beta
MSALDFLVELGTEELPPKALNTLAEAFLAGIDKGLQAAGLNYETKTVYAAPRRLAVLITSLATQQPDRSINLDGPPRQAAFDAEGNPTQAALGFAKKCGV ELSEIDQSGPKLRYSQSIAGKPTASLLPTIVEDSLNDLPIPKRMRWGARKEEFVRPTQWLVMLLGDEVIDCTILAQKAGRDSRGHRFHHPQNVRITSPAN YLADLRAAYVLADANERRDIISKRTEELATRQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDADGKLLPRFITVA NIESKDPQQIIAGNEKVVRPRLTDAEFFFKQDKKQKLEDFNLRLQNVVFQEKLGSVYDKAERVSKLAAFIAQRIGGNAAWASRAGLLSKCDLATEMVGEF PEMQGVAGYYYALNDGEPEEVALALNEQYMPRGAGAELPTTLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIDKKLDLDLNDAVA FAVNAFGAKIKAAGLNDAVLEFVFDRLRARYEDEGVDVATYLSVRALKPGSALDFDQRVQAVEAFRKLPEAAALAAVNKRVSNLLSKVEGSVPTVVEAKY FDNANEFSLYSAIQQADQAVQPMAAARQYSESLARLAALREPVDAFFEAVMVNAEDAKVRANRYALLARLRGLFLGVADISLLS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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