Strain | Pseudomonas sp. URMO17WK12:I12 D882DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGCCGTACGAAACCGATGAAGAGCGCGAATGCGCCGTCGGTGTCGGCGGTTACGCGCGGCCAATGCCCGCCAGCTGGATGCAACGTCAGGCCCTGGCCGT GCATGAACGCGCCAAGCAGGCTGACATCGTCATCACCACCGCACTGATTCCCGGCCGCAAGGCCCCGACGCTGTTGAGCGCGGAAACCGTGGCGCAGATG AAGCCGGGCTCAGTGGTCATCGACCTCGCGGCGGCTCAGGGCGGCAACTGCCCACTGACCGTGGCGGATCAGGTCGTAGTCGAGAATGGCGTGACCATTT GCGGCCCGACCAATCTGGCCGGTGCAGTGGCGGCAGACGCTTCGGCGCTGTATGCACGCAACCTGCTGGACTTCCTGAAGCTGGTCTTCAACAAAGACGG TCAGTTCGAAGTGAACCTCGAAGACGATATCGTCGCCGCGTGCCTGATGTGCCGCGACGGCCAAGTCATCCGCAAAAACGCCTAAGCAGGGATTCAGACG
|
|
DNA Sequence for Gene |
>D882_RS0126950
ATGGAAGAGCTTATCTCCCCCGGTATCTACAACCTGATCATCTTCGTGCTGGCGATTTATGTCGGTTATCACGTGGTCTGGAACGTTACACCTGCACTGC ACACGCCATTGATGGCCGTGACCAACGCCATCTCGGCCATCGTTATCGTCGGCGCCATGCTGGCGGCGGCGCTGACCGTCACGCCCCTGGGCAAAACCAT GGGGACCCTCGCGGTGGCCCTGGCGGCGGTGAACGTGTTTGGTGGCTTCCTGGTAACCCGCAGGATGCTTGAGATGTTCAAGAAAAAAGCCCCGAAAGTC GTAAAAGAAGAGGCGCCCAAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TGAGCATGAACCTTGTCACGACGCTCTACTTGATCGCGTCGATCTGCTTCATCCAGGCCCTTAAAGGCCTGTCGCACCCCACCACGTCCCGGCGCGGCAA TGTGTACGGCATGCTCGGCATGGCGTTGGCGATCCTCACCACCGTTGGCCTCATCTACAAGCTGGGCGCCGAGCTGGCCACTGCCGGTATCGGTTACGTC ATCGTCGGCCTGCTGGTCGGCGGCACCGCCGGCTCGATCATGGCCAAGCGCGTCGAGATGACCAAGATGCCGGAACTGGTCGCCTTCATGCATAGCATGA TTGGTATGGCCGCCGTGTTCATCGCCATTGCTGCGGTTGTTGAGCCGCAGTCCCTGGGCATCGTCAAGCAACTGGGCGACGCGATTCCAGCGGGTAACCG TCTGGAGCTGTTCCTCGGCGCAGCCATCGGTGCAATCACCTTCTCCGGTTCGGTGATCGCTTTCGGCAAGCTGTCGGGCAAGTACAAGTTCCGCCTGTTC
|
|
Amino Acid Sequence |
>NAD(P) transhydrogenase
MEELISPGIYNLIIFVLAIYVGYHVVWNVTPALHTPLMAVTNAISAIVIVGAMLAAALTVTPLGKTMGTLAVALAAVNVFGGFLVTRRMLEMFKKKAPKV VKEEAPK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|