Pseudomonas sp. URMO17WK12:I12, D882_RS0124880
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I12 D882DRAFT_scaffold00018.18_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGCAACGAGTCTTCGGTCAGCTTCAGGGTTTCCCGGGCACGCAACAGACTGTCGTGGATCTGGGTGCGCAGTTCATCTGCCTGATCGCCGGCCAGGGTC GCGGTGTGCTCCAGCAACCGCTCTGTGTCACTGACCAGGGTCTGAAAATCGTTCATCAGGATTTCTTGAGCAGTCTTTGCCTTGATGCTGGCCATGGGTG GATCTCCGTAAGTGGCTTCTGATGGGTTCGAGTATGAGCCTTGTGCGAAGGTTCAGTACAAATGACTGGTACAACTTTTGCTGTGTCGTGGTGCGTTTGC CGGCGCCGATGCGCTGTTGCCGGGCATGATTTCAGGAAAACCTCGGCTCAAACAATAAAAACTCGCGCGATGATTTCGCTCTGATGCGCCAAAGCGGTTC ATGGGGATCAGTGATTCGATCCGCATAAGCTGCAACTTGGTGCGTTAGCAGTCTGCGTGAACTGCTTTGGTGCTTTTTTAGCCTTTAGGTCTGCCATTCC
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| DNA Sequence for Gene |
>D882_RS0124880
ATGGAAAATCTGCAAAGCGCTGTGGACAGTCTGGTCCATAGCTCCAATACATTGTTCATCCTCATTGGCGCGGTCATGGTGCTGGCCATGCACGCCGGTT TCGCCTTTCTTGAGGTTGGCACGGTTCGGCAAAAGAACCAGGTCAACGCCTTGTCGAAAATTCTCAGCGACTTCGCCATTTCGACCCTGGCCTACTTCTT TATAGGCTATTGGATTTCCTACGGGGTGACGTTCCTGCAACCGGCGCCGGTGATCAATGCCGACCATGGTTATGGATTGGTGAAATTCTTCTTCCTGCTG ACCTTTGCAGCCGCCATCCCGGCGATCATTTCCGGCGGCATTGCCGAACGCGCCCGGTTCGTCCCGCAATTGTGCGCGACCGCGCTGATCGTGGCGTTCA TCTATCCCTTTTTCGAAGGGATGATCTGGAACGGCAATTATGGTTTGCAGGCCTGGTTGCTGGCGCGATTCGGCGCCAGCTTCCATGACTTTGCCGGTTC CGTGGTGGTGCATGCCATGGGCGGCTGGCTGGCCCTCGCGGCGGTGTTGTTGCTCGGGCCGCGACAAGGACGCTATCGCGATGGCCGCCTGGTGGCGTTT GCTCCGTCTAGCATTCCCTTCCTCGCCTTGGGCTCGTGGATCCTGATTGTTGGCTGGTTCGGCTTCAACGTCATGAGCGCCCAGACCCTGCAAGGCGTGA GCGGACTGGTGGCAGTGAACTCGTTGATGGCCATGGTCGGCGGAACCGTGGCGGCGCTGATCGTCGGGCGCAACGACCCAGGCTTTCTGCACAACGGCCC ATTGGCCGGGCTTGTGGCCATTTGCGCAGGCTCCGACCTGATGCACCCGGTGGGCGCACTGGTGACCGGCGCCATCGCCGGGGCGCTGTTTGTCTGGTGC TTTACCGCGGCGCAGGGCAAATGGCATATCGACGATGTGTTGGGCGTGTGGCCTTTGCACGGTCTGTGTGGCGTGTGGGGCGGTATCGCGTGCGGCATTT TTGGCCAGAGTGCGTTGGGCGGCCTGGGCGGTGTAAGTCTGATCAGCCAGTTGATCGGCACCTCGCTGGGTGTGGTCGTGGCGCTGGCTGGTGGTTTTGC GGTGTATGGAATGATCAAGGCGTTTCATGGACTGCGCTTGAGCCAGGAAGAGGAGTACTACGGTGCGGATTTGTCGGTGCATAAGATCGGCGCCGTCAGT CAGGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATCAATTTTCCGCATCTTCGGCTCCGGGATAAAAATCGTGGAGCATCCGATAGCGATCATGCCGGATCTGATCGGCCCGCTCCTGTACCTGATGGGCGGG CAGTCCCAGCATGATCAGTGCATGGGAGGCGAGCATCAGGCTGGACTCCAGCAACTCGGGTACGACTTCGTTGGCGCCGGCTTCTTTCAGCTCGGCCAGT TGGCTGTCATCGCGGGTACGAACCAGAATCGGCACTCTTGAATTGATCCGGCGAGCCTCCTTGAGGATCGCCAGCGCGATGTCAGGTTGGTCCACCGCAA TTACCAGCAACCTGGCACGCGCCAGTCCGACGGCAAGCAGTAATTCACCTCGACGCGAGTCTCCATAGTGCACGCTGCTTTCGCTGACAGCCGCTTCCTC AACCCTGACCGGATCGTGGTCCAGTGCAATGTAAGGTTGTTGCTGATGACTCAGGCAGCGACCGATGGACTGGCCGACGCGCCCGTAACCACAGATGACC
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| Amino Acid Sequence |
>ammonium transporter
MENLQSAVDSLVHSSNTLFILIGAVMVLAMHAGFAFLEVGTVRQKNQVNALSKILSDFAISTLAYFFIGYWISYGVTFLQPAPVINADHGYGLVKFFFLL TFAAAIPAIISGGIAERARFVPQLCATALIVAFIYPFFEGMIWNGNYGLQAWLLARFGASFHDFAGSVVVHAMGGWLALAAVLLLGPRQGRYRDGRLVAF APSSIPFLALGSWILIVGWFGFNVMSAQTLQGVSGLVAVNSLMAMVGGTVAALIVGRNDPGFLHNGPLAGLVAICAGSDLMHPVGALVTGAIAGALFVWC FTAAQGKWHIDDVLGVWPLHGLCGVWGGIACGIFGQSALGGLGGVSLISQLIGTSLGVVVALAGGFAVYGMIKAFHGLRLSQEEEYYGADLSVHKIGAVS QD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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