Pseudomonas sp. URMO17WK12:I12, D882_RS0121315
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I12 D882DRAFT_scaffold00014.14_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGGCACACGGTCTGTCGGCGGCGGCACTCTTTATCCTCAGCGGTCAGTTGTACGAGCGCACCCACACCCGCGACATGCGTGAAATGGGTGGCCTGTGG TCGAAGATTGCTTACCTGCCGGCCATCAGCCTGTTCTTCGCTGCGGCGTCCCTGGGCTTGCCGGGTACCGGTAACTTCGTCGGTGAGTTCCTGATCCTGA TCGGCACCTTCGCCGCTGCGCCGTGGATCACCGCGATCGCAACGTCGGGCCTGGTGTTCGGTTCGGTCTACTCGCTGATCATGATCCACCGTGCCTACTT CGGCCCGTCCAAGTCGGACGCGGTGTTGCATGGCATGGATGGTCGCGAACTGATCATGGTGGTCGGTCTGGCGGCGCTGCTGATTTACATCGGCGTGTAC CCGCAACCGTTCCTCGATACCTCTGCCGCGACGATGCATGGCGTGCAGCAGTGGCTCGGCTCCGCCTTCACTCAACTCGCTTCGGCCCGGTAAGAGCGCT
|
|
| DNA Sequence for Gene |
>D882_RS0121315
ATGGAATTCACGACTCAACACTTTATCGCGCTAGCGCCGTTGTTGATCACCAGCGCCACGATCATCGTGGTGATGCTGGCGATTGCCTGGCGCCGCAACC ACTCGCAGACCTTCCTGATTTCCGTGGCGGGCCTGAACCTGGCGTTGCTGTCGATCCTGCCAGCCCTGAAAGTCGCGCCATTGGCCGTGACCCCGTTGCT GCAAATCGATAGCTTTGCCTGCTTGTACATGGCGCTGATCCTGGTCGCCACCCTCGCTTGTGTGACCCTCGCCCACGCCTACCTCGGCGATGGCGGTTCG GGTTACCCGGGCAACCGCGAAGAACTGTACCTGCTGATCCTGATGTCCGCCGCCGGCGGCCTGGTTCTGGTCAGCGCGCAACATCTGGCCGGGTTGTTCA TCGGTCTGGAACTGTTGTCGGTGCCGGTCTACGGTCTGGTGGCCTACGCCTTCTTCAACAAGCGTTCGCTGGAAGCCGGTATCAAGTACATGGTGCTGTC GGCCGCCGGTTCTGCGTTCCTGTTGTTCGGCATGGCACTGCTGTACGCCGATTCGGGCAGCCTGAGCTTCGTCGGTATCGGCCAGGCGCTGGCCGCCACT GGCCTGCCAAGCTCGCTGGCGCAACTGGGCCTGGGCATGATGCTGATCGGTCTGGCGTTCAAGCTGTCGCTGGTACCGTTCCACCTCTGGACCCCGGACG TGTACGAAGGTGCTCCGGCACCGGTGGCCGCGTTCCTGGCAACCGCTTCCAAAGTCGCGGTGTTCGCGGTAATGGTGCGTCTGTTCCAGATCTCCCCAGC GGCAAGCAGCGGTGTGCTGAGCGACGTACTGACCATCATCGCCATCGCGTCGATCCTGTTCGGTAACCTGCTGGCACTGACCCAGAGCAACCTCAAGCGT CTGCTGGGTTACTCGTCCATCGCCCACTTCGGCTACCTGCTGATCGCCCTGGTCGCGAGCAAGGGTCTGGCCGTGGAAGCCATCGGCGTGTACCTGGTCA CCTACGTGATCACCAGCCTCGGCGCGTTCGGCGTGATCACCCTGATGTCCTCGCCGTACAACGGCCGTGACGCAGACGCGCTGTACGAATACCGCGGCCT GTTCTGGCGCCGTCCGTACCTGACCGCCGTACTGACCGTGATGATGCTGTCCCTGGCCGGTATCCCGCTGACCGCGGGCTTCATCGGCAAGTTCTACATC ATCGCCACCGGTGTCGAATCGCATCAATGGTGGCTGGTCGGTTCCCTGGTACTGGGCAGCGCCATCGGCGTGTTCTACTACCTGCGTGTGATGGTCACTT TGTACCTGATCGAGCCGAACCTGCGTCGCCACGATGCGCAACTGCACTGGGAACAACGTGCAGGCGGCGTGATGCTGCTGGCTATCGCGCTGGTCGCGTT CTTCCTCGGCGTTTACCCGCAGCCATTGCTGGTCCTGGTTCAACAGGCCGGCTTGGCGGGTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCGCTTAAGCGACACTCGGTCGAAAACAGAAACGGCACCTTCGGGTGCCGTTTTTGCATTTGTGGGATGTGGTATGGCGGCCCCCCAAATACGCTTTTGT GCGGGTAGCAAATGCCTTTCCGGTTGAGCTTGATGGGTAGCACCTTTACGGCTGTCCGAAGAGACTTCAAACACGATAGGAAAAGTCTCTACGCGCCTCC AGAAAAAATTGCTAATCCGTTAATTATTGCGATTTACCGTACTAAACGAGCTGAACTATCTCTCATGCCATTCGACCCAATTGCGGACGCGAATGCATCA TCAACCCGGGCTCTACCCCTATTTACGAATCACAATCGTCAATCGCCGATTGATGTGCACTTATTTCATTACAGCGACAATAACAACACTGAAACTTTCA GTCATTTTTGACCGATCATTTTCTAACTCATACAGTTGCTTCGTGCTTGATTTGGCACACTCACCAACCAACAACAAAGAGAGTCTAAACATGGGTTATC
|
|
| Amino Acid Sequence |
>NADH:ubiquinone oxidoreductase subunit N
MEFTTQHFIALAPLLITSATIIVVMLAIAWRRNHSQTFLISVAGLNLALLSILPALKVAPLAVTPLLQIDSFACLYMALILVATLACVTLAHAYLGDGGS GYPGNREELYLLILMSAAGGLVLVSAQHLAGLFIGLELLSVPVYGLVAYAFFNKRSLEAGIKYMVLSAAGSAFLLFGMALLYADSGSLSFVGIGQALAAT GLPSSLAQLGLGMMLIGLAFKLSLVPFHLWTPDVYEGAPAPVAAFLATASKVAVFAVMVRLFQISPAASSGVLSDVLTIIAIASILFGNLLALTQSNLKR LLGYSSIAHFGYLLIALVASKGLAVEAIGVYLVTYVITSLGAFGVITLMSSPYNGRDADALYEYRGLFWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYI IATGVESHQWWLVGSLVLGSAIGVFYYLRVMVTLYLIEPNLRRHDAQLHWEQRAGGVMLLAIALVAFFLGVYPQPLLVLVQQAGLAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|