Pseudomonas sp. URMO17WK12:I12, D882_RS0117680 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. URMO17WK12:I12 D882DRAFT_scaffold00011.11_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCAGGCGATCAAGGACGTGCTCGAAACCGAGATCCCGGTGTTCGGCATCTGCCTCGGTCACCAACTGCTGGCTCTGGCCTCCGGCGCCAAGACCCTGAAA ATGGGCCATGGCCACCACGGTGCCAACCACCCGGTCCAGGATCTGGACAGCGGTGTGGTGATGATCACCAGCCAGAACCACGGTTTTGCCGTAGACGAAG CGACCCTGCCGGCCAACGTTCGCGCGACCCACAAATCGCTGTTCGACGGCACCCTGCAAGGCATCGAGCGTACTGACAAGAGCGCCTTCAGCTTCCAGGG TCACCCGGAAGCCAGCCCTGGCCCGAACGACGTAGCGCCATTGTTCGATCGCTTCATCAACGAGATGGCCAAGCGACGCTGATCGCTCGCCTTGATGGTG CAAGGTTTGAGGGCGGTCCCGACACCGGCGGCCCCCTCAAGGCTTCAAAGATTGAACAAGACGGCTTGCCGACTGACCTGCGGATTTGAGTGACAAACCC
DNA Sequence for Gene
>D882_RS0117680 |carB
ATGCCAAAACGTACAGACATTAAAAGCATCCTGATTCTCGGCGCTGGCCCGATCGTTATCGGCCAGGCCTGCGAATTCGACTACTCCGGCGCCCAGGCCT GTAAAGCCCTGCGCGAAGAGGGTTACCGCGTCATCCTGGTGAACTCCAACCCGGCGACCATCATGACCGACCCGGACATGGCCGACGCCACCTACATCGA GCCGATCAAATGGCAGACCGTTGCCAAGATCATCGAGAAAGAGCGTCCGGACGCGCTGCTGCCAACCATGGGTGGCCAGACCGCTCTGAACTGTGCACTG GACCTGGAGCGCGAAGGCGTTCTGGAGAAGTTCGGCGTAGAGATGATCGGCGCCAATGCGGACACCATCGACAAGGCTGAAGACCGTTCGCGCTTCGACA AGGCGATGAAATCCATCGGCCTGGACTGCCCGCGTTCGGGTATCGCCCACAGCATGGAAGAAGCCAACGCCGTTCTCGAACGCCTGGGCTTCCCGTGCAT CATCCGTCCGTCCTTCACCATGGGTGGCACCGGTGGCGGTATTGCTTACAACCGTGAAGAATTCGAAGAAATCTGCGCCCGTGGTCTGGACCTGTCGCCA ACCAAAGAGCTGCTGATCGACGAATCCCTGATCGGCTGGAAAGAGTACGAGATGGAGGTTGTCCGCGATAAGAAGGACAACTGCATCATCGTCTGCTCCA TCGAAAACTTTGACCCGATGGGCGTGCACACTGGTGACTCGATCACTGTTGCGCCAGCACAGACCTTGACGGACAAGGAATACCAGATCATGCGTAACGC CTCGTTGGCGGTACTGCGTGAGATCGGCGTGGAAACCGGCGGCTCTAACGTTCAGTTCGGCATCTGCCCGGACACTGGCCGTATGGTCGTGATCGAGATG AACCCGCGTGTTTCCCGCTCTTCAGCGCTGGCCTCGAAAGCCACTGGTTTCCCGATTGCGCGTATCGCTGCCAAGCTGGCGATCGGCTACACCCTCGACG AACTGTCGAACGAAATCACCGGCGGCGCTACGCCTGCGTCCTTCGAGCCGTCCATCGACTACGTTGTGACCAAGCTGCCACGTTTCGCCTTCGAGAAATT CCCGAAAGCCGACGCACGCCTGACCACTCAAATGAAGTCGGTCGGTGAAGTCATGGCCATCGGCCGGACCTTCCAGGAATCCCTGCAGAAAGCCCTTCGC GGTCTGGAAGTGGGCGTTTGCGGCCTGGACGAGAAGCTCGACCTGAGCAACCCGGAAAGCATGAGCGTGCTCAAGCGCGAACTGACCGTGCCGGGCGCCG AGCGTATCTGGTACGTGGCTGATGCCTTCCGCGCCGGTCTGTCGGTCGAAGACATCTTCGGCATGAACATGATCGACCCGTGGTTCCTGGTGCAGATCGA AGATCTGATCAAGGAAGAAGAGAAGGTCAAGACCCTGGGTCTGGCCAGCATCGACCGCGACGTGATGTTCCGCCTCAAGCGCAAAGGCTTCTCCGACATG CGTCTGGCCAAGCTGCTGGGCGTGACCGAGAAGGCGTTGCGTCGCCACCGTCACAAGCTCGAGGTTTACCCGGTCTACAAGCGCGTTGACACCTGCGCGG CCGAGTTCGCCACCGACACCGCCTACATGTACTCGACTTACGAGGAAGAGTGCGAAGCCGCGCCATCGGGCCGCGACAAGATCATGATCCTCGGCGGCGG TCCAAACCGTATCGGCCAGGGTATCGAGTTCGACTACTGCTGCGTACACGCGGCATTGGCTCTGCGCGAAGACGGTTACGAGACCATCATGGTCAACTGC AACCCGGAAACCGTATCCACTGATTACGACACCTCCGATCGCCTGTACTTCGAGCCAGTGACCCTGGAAGACGTGCTGGAAATCTGCCGAGTCGAGAAGC CCAAAGGCGTGATCGTCCAATACGGCGGCCAGACTCCGTTGAAACTGGCTCGCGCTCTGGAAGAAGCCGGCGTGCCAATCATCGGCACCAGCCCTGACGC CATCGACCGTGCCGAAGATCGTGAGCGTTTCCAGCAAATGGTCGAGCGCCTGAACCTGCGTCAGCCGCCAAACGCCACCGTGCGCAGCGAAGACGAAGCG ATTCGTGCTGCTGCCAAGATCGGCTATCCGCTGGTGGTTCGTCCGTCCTATGTACTGGGCGGTCGTGCGATGGAAATCGTTTACGAAGAAGAAGAGCTGA AGCGTTACCTGCGTGACGCGGTGAAAGTGTCGAACGACAGCCCTGTGCTGCTCGACCACTTCCTCAACTGCGCCATCGAAATGGACGTGGATGCGGTCTG CGACGGCACTGACGTGGTGATCGGCGCGATCATGCAACACATCGAGCAGGCAGGCGTTCACTCCGGTGACTCCGCGTGCTCCCTGCCGCCGTACTCGCTG CCTGGCCACATCCAGGACGAGATGCGCGAACAGGTCAAGAAAATGGCCCTGGAACTGGGCGTGGTCGGCCTGATGAACGTTCAGTTGGCGCTGCAAGGCG AAGACATCTACGTCATCGAAGTCAACCCGCGTGCTTCCCGTACCGTACCGTTCGTATCGAAGTGCATTGGTGTTTCCCTGGCAATGATCGCGGCTCGCGT CATGGCCGGTAAAACCCTGAAGGAAATCGGTTTCACCAAAGAAATCATCCCGAACTTCTACAGCGTGAAAGAGGCGGTATTCCCATTCGCCAAATTCCCT GGTGTGGACCCGATCCTGGGCCCAGAGATGAAGTCCACTGGTGAAGTGATGGGCGTGGGCGACACCTTCGGTGAAGCATTCGCCAAGGCCCAGATGGGCG CCAGCGAAGTGCTGCCGACTGGCGGTACCGCGTTCATCAGCGTTCGCGACGACGACAAGCCACTGGTTGCAGGCGTCGCTCGTGATCTGATCAACTTGGG TTTCGAAGTGGTCGCCACTGCCGGTACTGCCAAGCTGATCGAAGCCGCAGGCCTGAAAGTGCGCCGTGTGAACAAGGTGACCGAAGGTCGTCCGCACGTG GTCGACATGATCAAGAATGACGAAGTCACCCTGATCATCAACACCACCGAGGGTCGCCAGTCGATTGCCGACTCGTACTCCATTCGTCGTAATGCCCTGC AGCACAAGATCTACTGCACCACGACTATTGCTGCTGGCGAAGCCATTTGCGAAGCGCTGAAGTTCGGTCCCGAGAAGACCGTGCGCCGCTTGCAGGATCT ACACGCAGGATTGAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCAAATACCCAATGACCGTCCAGGGCGCGAAAGCCCTGGAAGAAGAACACGCTCACCTGACCAAGGTCGTTCGTCCGAAGCTCAGCCAGGACATCGGCAC GGCCCGCGAGTTGGGTGACTTGAAGGAAAACGCCGAATACCACGCTGCTCGTGAGCAGCAAGGGATGGTTGAGGCGCGGATTCGTGACATCGAAGGCCGG ATTCAGAATCAGGTCATCATTGACGTCACGACCATTCCTCACACTGGCAAAGTGATTTTCGGCACGACCGTTGAAATCGCCAACGTCGAGACTGATGAAA GCGTCACCTACCACATCGTGGGTGAGGACGAGGCTGATTTCAAACTCGGCAAGATTTCCGTCGGTTCACCGCTGGCCCGCGCCTTGATTGCCAAGGAAGA GGGGGATGTGGTTGCCGTGAAAACGCCGAGTGGCGTGATCGAGTACGAGATTGTCGAAGTCCGCCACATCTAAAAGCCTGCGTCCGCTGCGTGCGGGCGC
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCAL DLEREGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLERLGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEM NPRVSRSSALASKATGFPIARIAAKLAIGYTLDELSNEITGGATPASFEPSIDYVVTKLPRFAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGVCGLDEKLDLSNPESMSVLKRELTVPGAERIWYVADAFRAGLSVEDIFGMNMIDPWFLVQIEDLIKEEEKVKTLGLASIDRDVMFRLKRKGFSDM RLAKLLGVTEKALRRHRHKLEVYPVYKRVDTCAAEFATDTAYMYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLARALEEAGVPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEA IRAAAKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSL PGHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site