Pseudomonas sp. URMO17WK12:I12, D882_RS0109790
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I12 D882DRAFT_scaffold00006.6_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATCCTGCAATACATAACGCATGGTCAGCTGACTGGAGGGCGCGAGCCGGGCCAGGTAGACCGTCAACGGGTTGGTCTTTGAAGCAACAGGATGGGTAAC AGGTAAGTCAGTCAAACGAAACGGCCTTGAGTTAAAACACTGCAGTAAAACAACTAAGGATTGAAACATTCCTCATCTAAAGCGGAGACTTCCGTAGGAC TTTTCTTCTGAAAACCACGATGAACGGCAGGAGTCTGAACAGTGCCTGTATGGCTCTCAGATAAATGATTTGCCGACCGGGTTTTCATGTTCCTTTCACG AAATTGCGCATACCCTCAATGAGTCGCGGCTGTCCCTCACAGGGTCCCAACGTGCCGACTGGAACAGAAAAAGTCAATTGAGGCGATTTGTCAGGCATTT TATGTAACCGATTGAAGCAGCTTCTTTTTTATCGACTACGCTTTTTTTGGATCCAAAAAATCCAGTACCACCGATTGTTCAAATCCAGCCCGAGGTGCCC
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| DNA Sequence for Gene |
>D882_RS0109790
ATGAGTCAGGCGTTTCTCCCCTTTTCCCGCCCAAGTATCGGCGATGAAGAAATTGCAGCCGTCGAGCAAGTATTGCGCTCCGGCTGGATCACCACCGGGC CAAAAAATCAACAATTGGAAGAGCAGTTCGCCAACTATGTCGGATGCCGCCACGCCGTTGCACTTTCCTCGGCCACCGGTGGCATGCACATCACCTTGCT GGCCTTGGGCATCGGGCCGGGCGATGAAGTCATTACCCCGTCCCAGACATGGGTGTCCACCGCCAACATGATCTGCCTGCTGGGCGCGACGCCGGTGTTC GTCGACGTCGACCGCGACACCCTGATGAGCGATCTGGACAGCATCGAGGCCGCCATCACCCCACGTACCAAAGCCATCATTCCGGTGCACTACGCGGGCG CTGCCTACGATCTCGACCCGCTGTATGCGCTGGCTGACAAACACGGCATTCCTGTCATCGAAGACGCCGCCCACGCCGCTGGCACCTTCTACAAAGGTCG TCATGTCGGTTCCAAGGGCACGGCGATCTTCTCGTTTCACGCCATCAAGAACATGACCTGCGCTGAAGGCGCGATGTTTGTCAGCGACGATGAAGCGCTG GCCAATCGGGTGCGCATGCTCAAGTTTCACGGCCTCGGCGTCGACGCCTATGACCGCCTGACTGGCGGCCGCAAACCGCAGGCGCAAGTGATTGAACCGG GTTTCAAATACAACCTGGCCGACATCAATGCTGCCATCGCCCTGGTGCAACTGGAGCGACTTGAAGAAATCAACGCTAAACGCACCCAGCTGGCACAAAC GTACTTGCATCGCCTGGAAGGCTGCGCCGTGCAACCGCTGGCGATACCGACTTACCCGCAACAACACGCCTGGCACCTGTTTATCCTGCGCATCGACGCC GAGCGTTGCGGCCTGGACCGTGAAGCGTTCATGAAGGGCTTACAGGAGCAGAACATCGGCACTGGCATCCACTTTATCGCCACCCATTTGCACACGTATT ATCGTCAGCGGTTCCCGAACATTTACTTGCCTAACACCGAATGGAATTCGGCCCGGCTGTGTTCGATTCCCTTGTTCCCCGACATGACCTGCGATGATGT CAATCGTGTGGTCGATGCCATTGAAAACGTTATGGACAGATCTCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACCTTACCCAATCCGTTGCGTGTCGGTTGTTATCCCGGTCTACAACGAGCAAGACAGTCTGCCCGAGTTGCTGCGGCGTACCGAAGCGGCCTGTGCGCA GCTGCACCATGAATACGAAATAGTGCTGGTGGATGACGGCAGTCGCGACAACTCGGCGCAAATCCTCGAAGAGGCTGCCAGTCGCGAAGGCAGCCCGGTG GTCGCGGTCATTCTCAACCGCAACTATGGTCAGCATGCGGCAATCATGGCCGGTTTCGAACACTGCAAAGGTGATGTCGTCATCACGCTCGATGCCGACC TGCAAAACCCGCCTGAAGAAATTCCGCGACTGGTGGCCCAGGCCGAACTCGGTTATGACGTGGTCGCCACCGTGCGCAACAACCGTCAGGACTCGGCCCT GCGTCGCTGGCCGTCGAAACTGATCAACATGGCCGTGCAGCGCTCGACCGGCGTTGCCATGAGCGATTACGGCTGCATGTTGCGTGCTTATCGCCGGACC
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| Amino Acid Sequence |
>UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
MSQAFLPFSRPSIGDEEIAAVEQVLRSGWITTGPKNQQLEEQFANYVGCRHAVALSSATGGMHITLLALGIGPGDEVITPSQTWVSTANMICLLGATPVF VDVDRDTLMSDLDSIEAAITPRTKAIIPVHYAGAAYDLDPLYALADKHGIPVIEDAAHAAGTFYKGRHVGSKGTAIFSFHAIKNMTCAEGAMFVSDDEAL ANRVRMLKFHGLGVDAYDRLTGGRKPQAQVIEPGFKYNLADINAAIALVQLERLEEINAKRTQLAQTYLHRLEGCAVQPLAIPTYPQQHAWHLFILRIDA ERCGLDREAFMKGLQEQNIGTGIHFIATHLHTYYRQRFPNIYLPNTEWNSARLCSIPLFPDMTCDDVNRVVDAIENVMDRSQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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