Pseudomonas sp. URMO17WK12:I12, D882_RS0109010
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I12 D882DRAFT_scaffold00005.5_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGTTGCGCCGATCTGGCTGGATGACTTGGTGGCTGCCGGAATCCCCCATGAATGGAGCACCGACATCCTCACGCGGCTGTGGCGAAAACTGGCGCTTAA CTGTGCGATCAACCCCCTGACAGTCCTTCATAACTGCCGTAATGGCGGGTTGCAGGCGCATCAGTGCGAAGTCGCGACCCTCTGCGGTGAATTGACCGAG TTGCTGGAACGGTGTGGTCAGCCCGCTGCGGCAGAAAACCTGCAACAGGAAGTCGAGCGCGTCATCCAGGCCACGGCGGCCAACTACTCCTCGATGTACC AGGACGTCGCGAATCAGCGCCGCACCGAAATCACCTACCTGCTGGGCCATGTGTGCAAAGTGGCCGAGCGTCATCAACTGAACCTGCCCCACCTGCATCA ATTACAGCAGCGGCTGATCGGCCATCTGCACAGCCTTGGATTGCCCAGCGACTGAGCAGCGGCTACGCTGGCCACGTGTTCCATTTAAGCGACGAACCTG
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| DNA Sequence for Gene |
>D882_RS0109010
ATGCCATTGCGCCAGCGCCTTGAAAACCTTCCCGTCGGCCAGAAGCTGCTGGCCGCCCTGCTGGTGCTGTTGATCACCATCCTGCTGGTTGCCAACCTGA CCTTCATCAGCGCGGCGTATTACATCTCCCAGGAAAGCATGGCGCCCCAAGCCTTGCAGACCATTGGCCGACTGGTGTCGAACCCGAGCCTGGTGGCCGA CGCCCTGAAGACGCCACAAAACGCCGAACGCCTGCTCAACGAACTCAACAGTTACTCGCCGCTGCGTGCAGCCGCCATTTATGACGGCAAGGGCGAACGG CTGGCCCAGTTGCAGCATGGCGACAAACTCAGCCTGCCGGGGCGCTATCAGCACATAGAGGCTTGGCAAGCGACCGAGTTTCGCAGCAATCAACTGATCA CCCTGCCCCGCCCCGGCACTGAGCCTGGCCATTTGTTGCTGGTGGCCAGCAGTGAGCTGCCAATGGCGTTCTACACCGGAACCCTGACTGCCAGCCTGGG CATTCTGATCTTCAGCGTGTTGTTGTGGCTGGTAATTGCCCGGCAAATCAAACGGCTGATTACCCGCCCCATCCATGAGCTCGAAGAGCTGTCCCGGCAG GTGACCCGCGAAGAGAACTACGCGCTGCGAGCCTCCCGTGGCAACCACGACGAAATCGGCAGCCTCGCCGAGGCGTTCAACACCATGCTCTCGCGGATCG AAGCCCGTGAGCAGCAACTCAAACGGGCCCGGGACGACTCCCAGGCCGCTTACGACCAGGCCCAGGGCCTGGCCGAAGAAACGCGCCATACCAATCGCAA GCTGGAACTCGAAGTCCAGGTGCGCAGCAAGATCGAGAAAAAGCTCACCGGTTTCCAGAATTACCTCAACAGCATCATCGACTCTATGCCGTCGGCGCTG ATCGCCCTCGACGAACAGCTCTACGTGACCCAGTGGAATCAGGAGGCCAGCGCCCTGTCCGGCACGCGCCTGGACGAAGCGCTGAACCAGCCGATCTTCC TCGCCTTCGAACCGTTGAAGCCGTTTCTGCCGCAGCTCAAGCAAACCGTCGAGCAGCACACCGTGGCCAAGATCGAGCGGGTAACGTGGTTCAAGGACGA TGAGCCCAAGCATTACGCCCTGACCTTTTACCCGCTGATGGGCGGCGCCGGGCGCGGCGTGGTGATTCGGATCGACGACATCACTCAGCGCCTGTCGCTG GAAGAAATGATGGTGCAGTCGGAGAAAATGCTCTCGGTCGGTGGCCTCGCCGCCGGCATGGCCCACGAAATCAATAACCCGTTGGGCGCGATCCTGCACA ACGTGCAGAACATTCGCCGACGCCTGTCACCTGACCTGCCGAAGAACCTGGAGCAGGCCGAGCACATCGGCATCGAGCTGGAAACGGTCAACCGGTACCT GCAAGCGCGCGAAGTCCCGCAACTGCTCGACGGCATTCAGCAAGCCGGCGCCCGGGCGGCGAAGATTGTGACGCACATGCTCAGCTTCAGCCGTCGCAGC ACCCGGCAAATGGCCCCGTGCGACCTGCCGGCGCTGATCGATCAAGCGGTGGAAATCGCCGGTAACGACTTCGACCTGGCGATTGGTTTCGACTTCAAGG GCCAGGCAATCATTCGCCAGTTCGATCCGGCCCTCGGCCCGGTGCCCGGCACGGCCAACGAATTGGAGCAGGTGCTGCTCAACCTGTTGAAAAACGCGGC TCAGGCCATTCACCAGCGTGAAGATGACCGCGAACCGGGACGGATCATTCTGCGCACCAAACTGAATCCGCCCTGGGCGGAAATCCAGGTGGAGGACAAC GGCATCGGCATGAGCGAAAACGTGCGCAAACGCACGTTCGAGCCGTTCTTCACCACTAAGGAAATCGGCCAGGGCACGGGGTTGGGCCTGTCGGTTTCCT ATTTCATCATCACCAACAATCACAAGGGCCAGATGGAAGTGCAATCGACGCCGGGCCAAGGCACCTGTTTCACCTTGCGCCTGCCCTTGGCGGGCACGCC AGTCATCTCTCAAGAACTCAATCAGCTATCGAGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCATGGGCTTTCGCTTGTCGAAAATTTACACCCGCACTGGCGACAAAGGCGAAACCGGGCTTGGCGATGGTCGCCGGGTGCCCAAGGATCACCCGCGGA TCGAGGCCATTGGCGAAGTCGACTCGCTGAACAGCCAGGTCGGTGTGCTGTTGGCCGGGTTGGCCGCAGAACGCATCACATATCCGGGGTTGAACGAGGT GATCGAGGTGTTGGCGCCTTGCCAGCACCGCTTGTTCGACTTGGGTGGCGAGCTGGCGATGCCGGAGTATCAGGCGTTGGACGCGGCGGAGATCGAACGC CTGGAAGCGGCGATTGATCACTGGAATGAAGAGTTGGGACCGCTGGAGAATTTCATACTGCCCGGCGGTTCAGCGTTGATCGCTCAGGCGCATGTGTGCA GGTGCCTGGCGCGCACTGCGGAACGGCGGTGCCAGCAGTTGAATGCGATTGAACCGTTGGCCGGGGTTGGGTTGGCGTATATCAATCGGTTGTCGGATGT
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| Amino Acid Sequence |
>histidine kinase
MPLRQRLENLPVGQKLLAALLVLLITILLVANLTFISAAYYISQESMAPQALQTIGRLVSNPSLVADALKTPQNAERLLNELNSYSPLRAAAIYDGKGER LAQLQHGDKLSLPGRYQHIEAWQATEFRSNQLITLPRPGTEPGHLLLVASSELPMAFYTGTLTASLGILIFSVLLWLVIARQIKRLITRPIHELEELSRQ VTREENYALRASRGNHDEIGSLAEAFNTMLSRIEAREQQLKRARDDSQAAYDQAQGLAEETRHTNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSAL IALDEQLYVTQWNQEASALSGTRLDEALNQPIFLAFEPLKPFLPQLKQTVEQHTVAKIERVTWFKDDEPKHYALTFYPLMGGAGRGVVIRIDDITQRLSL EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPDLPKNLEQAEHIGIELETVNRYLQAREVPQLLDGIQQAGARAAKIVTHMLSFSRRS TRQMAPCDLPALIDQAVEIAGNDFDLAIGFDFKGQAIIRQFDPALGPVPGTANELEQVLLNLLKNAAQAIHQREDDREPGRIILRTKLNPPWAEIQVEDN GIGMSENVRKRTFEPFFTTKEIGQGTGLGLSVSYFIITNNHKGQMEVQSTPGQGTCFTLRLPLAGTPVISQELNQLSR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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