| Jun 19, 2007 |
PA4708
|
Pseudomonas aeruginosa
PAO1 |
New gene name: phuT (Existing value: blank). New product name: Heme-transport protein, PhuT (Existing value: hypothetical protein). New product name confidence: Class 2 (Existing value: Class 4). New PseudoCAP function class: Transport of small molecules. Deleting function class: Hypothetical, unclassified, unknown. New subcellular localization: Periplasmic (Existing value: Unknown). New subcellular localization confidence: Class 2 (Existing value: Class 3).New evidence reference (PMID): 17387526.
|
Literature review. Approved by reference author Maolin Guo, University of Massachusetts Dartmouth, USA.
|
| Jun 19, 2007 |
PA4976
|
Pseudomonas aeruginosa
PAO1 |
New gene name: aruH (Existing value: aspC). Deleting gene name: aspC. New product name: Arginine:Pyruvate Transaminas, AruH. Deleting product name: aspartate transaminase. New product name confidence: Class 1 (Existing value: Class 2). New evidence reference (PMID): 17416670. New evidence reference (PMID): 17416668. New pathway: arginine transaminase (ATA) pathway.
|
Zhe Yang and Chung-Dar Lu, Georgia State University, USA.
|
| Jun 19, 2007 |
PA4977
|
Pseudomonas aeruginosa
PAO1 |
New gene name: aruI (Existing value: blank). New product name: 2-ketoarginine decarboxylase, AruI (Existing value: probable acetolactate synthase large subunit). New product name confidence: Class 1 (Existing value: Class 3). New evidence reference (PMID): 17416668. New evidence reference (PMID): 17416670. Deleting product name: probable acetolactate synthase large subunit.
|
Zhe Yang and Chung-Dar Lu, Georgia State University, USA.
|
| Jun 19, 2007 |
PA1867
|
Pseudomonas aeruginosa
PAO1 |
New product name confidence: Class 1 (Existing value: Class 4). New evidence reference (PMID): 17351035. New product name: XphA (Existing value: hypothetical protein). New gene name: xphA (Existing value: blank). Deleting alternate gene name: xphA.
|
Literature review. Approved by reference author Alain Filloux, Laboratoire d'Ingenierie des Systemes Macromoleculaires, France.
|
| Jun 19, 2007 |
PA0470
|
Pseudomonas aeruginosa
PAO1 |
New product name: Ferrichrome receptor FiuA (Existing value: probable hydroxamate-type ferrisiderophore receptor). New evidence reference (PMID): 16484199. New product name confidence: Class 1 (Existing value: Class 3). New subcellular localization confidence: Class 1 (Existing value: Class 2). New gene name: fiuA (Existing value: blank). Deleting alternate gene name: fiuA.
|
Maria A. Llamas, Department of Medical Microbiology, The Netherlands.
|
| Jun 19, 2007 |
PA2466
|
Pseudomonas aeruginosa
PAO1 |
New product name confidence: Class 1 (Existing value: Class 3). New product name: Ferrioxamine receptor FoxA (Existing value: probable TonB-dependent receptor). New gene name: foxA (Existing value: blank). New subcellular localization confidence: Class 1 (Existing value: Class 2). New evidence reference (PMID): 16484199.
|
Maria A. Llamas, Department of Medical Microbiology, The Netherlands.
|
| Jun 19, 2007 |
PA2467
|
Pseudomonas aeruginosa
PAO1 |
New evidence reference (PMID): 16484199. New product name confidence: Class 1 (Existing value: Class 3). New product name: Anti-sigma factor FoxR (Existing value: probable transmembrane sensor). New gene name: foxR (Existing value: blank).
|
Maria A. Llamas, Department of Medical Microbiology, The Netherlands.
|
| Jun 19, 2007 |
PA2468
|
Pseudomonas aeruginosa
PAO1 |
New product name confidence: Class 1 (Existing value: Class 3). New evidence reference (PMID): 16484199. New gene name: foxI (Existing value: blank). New product name: ECF sigma factor FoxI (Existing value: probable sigma-70 factor, ECF subfamily).
|
Maria A. Llamas, Department of Medical Microbiology, The Netherlands.
|
| Jun 19, 2007 |
PA2412
|
Pseudomonas aeruginosa
PAO1 |
New structure feature: PDB Accession: 2PST.
|
Andrew Gulick, Hauptman-Woodward Institute, Buffalo, NY, USA.
|
| Jun 19, 2007 |
PA2634
|
Pseudomonas aeruginosa
PAO1 |
New product name confidence: Class 1 (Existing value: Class 3). New evidence reference (PMID): 17319879. New product name: isocitrate lyase (Existing value: probable isocitrate lyase). New homology: 72% identical to the isocitrate lyase (ICL) characterized from Colwellia maris, but is less than 30% identical to their homologues from pseudomonads.. New gene name: aceA (Existing value: blank).
|
Jesus Campos-Garcia, Universidad Michoacana, Mexico.
|
| Jun 19, 2007 |
PA5111
|
Pseudomonas aeruginosa
PAO1 |
New evidence reference (PMID): 17513180. New product name confidence: Class 1 (Existing value: Class 2).
|
Nicole Sukdeo, Department of Chemistry, University of Waterloo, Canada.
|
| Jun 19, 2007 |
PA0710
|
Pseudomonas aeruginosa
PAO1 |
New product name confidence: Class 1 (Existing value: Class 2). New evidence reference (PMID): 17513180 .
|
Nicole Sukdeo, Department of Chemistry, University of Waterloo, Canada.
|
| Jun 19, 2007 |
PA3524
|
Pseudomonas aeruginosa
PAO1 |
New evidence reference (PMID): 15270717. New product name confidence: Class 1 (Existing value: Class 2).
|
Nicole Sukdeo, Department of Chemistry, University of Waterloo, Canada.
|