Pseudomonas monteilii SB3078

Strain Overview
Organism Name Pseudomonas monteilii SB3078
Species Pseudomonas monteilii
Strain SB3078
Description/Title Pathogen: clinical or host-associated sample from Pseudomonas monteilii SB3078
Annotated Genes 5566
Partial Genes
Host Information
Geographic Location
Location Name USA: VA, Salem
Isolation Source motor oil-contaminated soil
Sample Provider
Name
E-mail
Institution
Date Collected missing

MLST Data

Database Scheme Sequence Type Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_000510285.1
Assembly Status latest
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Cross-References
NCBI BioSample Accession SAMN02641476
NCBI Taxonomy ID 1435044
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details
Genome Browsers*
Pseudomonas monteilii SB3078, complete genome.

Annotated Features

Feature Count
gene 5523
CDS 5436
tRNA 67
pseudo 43
rRNA 19
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2419
Cytoplasmic Membrane 1241
Periplasmic 157
Outer Membrane 129
Extracellular 33
Unknown 1337
Unknown (This protein may have multiple localization sites) 120
Flagellar 17
Fimbrial 3

Replicons

Name Length GC
Pseudomonas monteilii SB3078, complete genome. 6000087 bp 62.5%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF