| Strain Overview | |
|---|---|
| Organism Name | Pseudomonas resinovorans DSM 21078 |
| Species | Pseudomonas resinovorans |
| Strain | DSM 21078 |
| Description/Title | Generic sample from Pseudomonas resinovorans DSM 21078 |
| Annotated Genes | 5539 |
| Partial Genes | 205 |
| Host Information |
|---|
| Geographic Location | |
|---|---|
| Location Name | France: Vienne |
| Isolation Source | soil |
| Latitude/Longitude | 45.5289 N 4.87429 E |
| Database | Scheme | Sequence Type | Alleles | |
|---|---|---|---|---|
| Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst). | ||||
| Assembly | |
|---|---|
| Assembly DB |
RefSeq
|
| Assembly Accession | |
| Assembly Status | latest |
| Scaffolds | 53 |
| Contigs | 60 |
| Contig N50 | 182474 |
| Assembly Level | Scaffold |
| Percent GC | |
| Cross-References | |
|---|---|
| NCBI BioSample Accession | SAMN02441499 |
| NCBI Taxonomy ID | 1123020 |
| NCBI Bioprojects | |
| Related Data | |
|---|---|
| Additional Genome Project Info | |
| Sequencing Information | |
| Genome Assembly Information | |
| Feature | Count |
|---|---|
| gene | 5512 |
| CDS | 5446 |
| tRNA | 58 |
| pseudo | 27 |
| rRNA | 6 |
| ncRNA | 2 |
| Localization | Count |
|---|---|
| Cytoplasmic | 2399 |
| Cytoplasmic Membrane | 1102 |
| Unknown | 1073 |
| Unknown (This protein may have multiple localization sites) | 147 |
| Periplasmic | 143 |
| Outer Membrane | 114 |
| Extracellular | 31 |
| Flagellar | 16 |
| Fimbrial | 2 |
| Genomic | ORF DNA | Intergenic | Amino Acid |
| TSV | CSV | GBK | EMBL | GFF3 | GFF3 + sequence | GTF |