Pseudomonas mosselii SJ10

Strain Overview
Organism Name Pseudomonas mosselii SJ10 - Assembly GCF_000498975.2
Species Pseudomonas mosselii
Strain SJ10
Description/Title Sample from Pseudomonas mosselii SJ10
Annotated Genes 5704
Partial Genes 150
Host Information
Geographic Location
Location Name South Korea: Daegu
Isolation Source wastewater
Sample Provider
Name Sung-Jun Hong
E-mail sjhong@knu.ac.kr
Institution Kyungpook National University, Shin's Lab
Date Collected

MLST Data

Database Scheme Sequence Type Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_000498975.2
Assembly Status latest
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Cross-References
NCBI BioSample Accession SAMN02470220
NCBI Taxonomy ID 1388763
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details
Genome Browsers*
Pseudomonas mosselii SJ10, complete genome.

Annotated Features

Feature Count
gene 5674
CDS 5574
tRNA 77
pseudo 30
rRNA 22
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2441
Unknown 1357
Cytoplasmic Membrane 1283
Outer Membrane 159
Periplasmic 157
Unknown (This protein may have multiple localization sites) 126
Extracellular 51

Replicons

Name Length GC
Pseudomonas mosselii SJ10, complete genome. 6247860 bp 63.4%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF