Pseudomonas stutzeri 28a24

Strain Overview
Organism Name Pseudomonas stutzeri 28a24
Species Pseudomonas stutzeri
Strain 28a24
Description/Title Pseudomonas stutzeri 28a24 (DBL332)
Annotated Genes 4291
Partial Genes 112
Host Information
Geographic Location
Location Name Israel
Isolation Source soil
Sample Provider
Name David Baltrus
E-mail baltrus@email.arizona.edu
Institution University of Arizona
Date Collected 2002

MLST Data

Database Scheme Sequence Type Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_000590475.1
Assembly Status latest
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Cross-References
NCBI BioSample Accession SAMN02673421
NCBI Taxonomy ID 316
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details
Genome Browsers*
Pseudomonas stutzeri strain 28a24, complete genome.

Annotated Features

Feature Count
gene 4238
CDS 4166
tRNA 59
pseudo 53
rRNA 12
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 1967
Cytoplasmic Membrane 1047
Periplasmic 117
Outer Membrane 83
Extracellular 35
Unknown 810
Unknown (This protein may have multiple localization sites) 107

Replicons

Name Length GC
Pseudomonas stutzeri strain 28a24, complete genome. 4731359 bp 60.6%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF