Pseudomonas alkylphenolia KL28

Strain Overview
Organism Name Pseudomonas alkylphenolia KL28
Species Pseudomonas alkylphenolia
Strain KL28
Description/Title Microbe sample of Pseudomonas alkylphenolia
Annotated Genes 5283
Partial Genes 157
Host Information
Geographic Location
Location Name Korea: Changwon
Isolation Source soil
Sample Provider
Name Ingyu Hwang
E-mail ingyu@snu.ac.kr
Institution Seoul National University
Date Collected 01-Jul-2002

MLST Data

Database Scheme Sequence Type Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_000746525.1
Assembly Status latest
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Cross-References
NCBI BioSample Accession SAMN02929205
NCBI Taxonomy ID 237609
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details
Genome Browsers*
Pseudomonas alkylphenolia strain KL28, complete genome.

Annotated Features

Feature Count
gene 5236
CDS 5149
tRNA 68
pseudo 47
rRNA 18
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2275
Cytoplasmic Membrane 1204
Periplasmic 165
Outer Membrane 133
Extracellular 42
Unknown 1216
Unknown (This protein may have multiple localization sites) 114

Replicons

Name Length GC
Pseudomonas alkylphenolia strain KL28, complete genome. 5764622 bp 60.6%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF