| Strain Overview | |
|---|---|
| Organism Name | Pseudomonas zeshuii 89C1 |
| Species | Pseudomonas zeshuii |
| Strain | 89C1 |
| Description/Title | |
| Annotated Genes | 5130 |
| Partial Genes | 128 |
| Host Information |
|---|
| Geographic Location | |
|---|---|
| Location Name | USA:Albany |
| Latitude/Longitude | 44.629944 N 123.090493 W |
| Sample Provider | |
|---|---|
| Name | Alexander McFarland |
| alexandermcfarland2022@u.northwestern.edu | |
| Institution | Northwestern University |
| Date Collected | 2016 |
| Database | Scheme | Sequence Type | Alleles | |
|---|---|---|---|---|
| Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst). | ||||
| Assembly | |
|---|---|
| Assembly DB |
RefSeq
|
| Assembly Accession | Assembly Status | latest |
| Scaffolds | 31 |
| Contigs | |
| Contig N50 | 532420 |
| Assembly Level | Contig |
| Percent GC |
| Cross-References | |
|---|---|
| NCBI BioSample Accession | SAMN14085457 |
| NCBI Taxonomy ID | 1076620 |
| NCBI Bioprojects |
| Related Data | |
|---|---|
| Additional Genome Project Info | |
| Sequencing Information | |
| Genome Assembly Information |
| Genomic | ORF DNA | Intergenic | Amino Acid |
| TSV | CSV | GBK | EMBL | GFF3 | GFF3 + sequence | GTF |