This is a list of Pseudomonas strains for which annotations and sequences can be found in the Pseudomonas Genome Database. For a more comprehensive list of ongoing genome sequencing, transcriptome and epigenomic projects based on what are registered in the NCBI BioProject database, please check out our searchable, user-friendly listing of BioProjects.
By default, strains having completely sequenced genomes and draft genomes are shown, however you can filter the list by using the wide range of criteria below. We plan to expand the search functionality as the number of genomes sequenced grows and metadata standards mature.
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Strain | Assembly | Contigs | Assembly Level | Genes (partial) | BioSample Accession | Host Organism | Host Disease | Isolation Source | Location | MLST | Institution | |
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Pseudomonas aeruginosa 22112 | GCF_030253475.1 latest |
- | Complete Genome | 6493 (77) | SAMN33329571 | Corneal ulcer | Left cornea scraping | USA: Cleveland, Ohio | 1203 (paeruginosa) | Case Western Reserve University |
Strain Details
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Pseudomonas aeruginosa 223, isolate 223A | GCF_902633035.1 latest |
- | Contig | 6112 (199) | SAMEA6109558 | throat swab | 313 (paeruginosa) | EBI |
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Pseudomonas aeruginosa 223, isolate 223B | GCF_902633075.1 latest |
- | Scaffold | 5935 (106) | SAMEA6109559 | rectal swab | 274 (paeruginosa) | EBI |
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Pseudomonas aeruginosa 223, isolate 223C | GCF_902633045.1 latest |
- | Contig | 5954 (120) | SAMEA6109560 | throat swab | 274 (paeruginosa) | EBI |
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Pseudomonas aeruginosa 2230_S2 | GCF_021060655.1 latest |
- | Contig | 5930 (167) | SAMN20752078 | Spain | Instituto de Investigacion Sanitaria y Biomedica de Alicante |
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Pseudomonas aeruginosa 224/1 | GCF_022552225.1 latest |
- | Scaffold | 6008 (115) | SAMN23763317 | Russia: Samara | 291 (paeruginosa) | Pirogov Russian National Research Medical University |
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Pseudomonas aeruginosa 225 | GCF_016836615.1 latest |
- | Scaffold | 6482 (169) | SAMN17723435 | Stricture Urethra | India: Puttaparthi, Urology Ward | 654 (paeruginosa) | Sri Sathya Sai Institute of Higher Learning |
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Pseudomonas aeruginosa 225/1 | GCF_022552245.1 latest |
- | Scaffold | 5952 (125) | SAMN23763318 | Russia: Samara | 198 (paeruginosa) | Pirogov Russian National Research Medical University |
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Pseudomonas aeruginosa 2253 | GCF_002193735.1 latest |
125 | Contig | 6478 (170) | SAMN07185684 | human | not collected | wound | USA | 389 (paeruginosa) | JCVI |
Strain Details
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Pseudomonas aeruginosa 227 | GCF_016836585.1 latest |
- | Scaffold | 6132 (150) | SAMN17723436 | Rheumatic heart disease | India: Puttaparthi, CTVS ICU | 235 (paeruginosa) | Sri Sathya Sai Institute of Higher Learning |
Strain Details
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Pseudomonas aeruginosa 2272_S5 | GCF_021060575.1 latest |
- | Contig | 5893 (141) | SAMN20752081 | Spain | 2124 (paeruginosa) | Instituto de Investigacion Sanitaria y Biomedica de Alicante |
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Pseudomonas aeruginosa 23 | GCF_030024655.1 latest |
- | Scaffold | 6414 (403) | SAMN34372908 | Nigeria | 773 (paeruginosa) | Cepheid |
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Pseudomonas aeruginosa 230_PAER | GCF_001062995.1 latest |
149 | Scaffold | 6431 (151) | SAMN03197421 | human | USA: WA | 298 (paeruginosa) | University of Washington |
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Pseudomonas aeruginosa 2320 | GCF_002193655.1 latest |
105 | Contig | 6494 (147) | SAMN07185683 | human | not collected | et tube | USA | 253 (paeruginosa) | JCVI |
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Pseudomonas aeruginosa 2321 | GCF_002193745.1 latest |
70 | Contig | 5851 (91) | SAMN07185682 | human | not collected | wound | USA | JCVI |
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Pseudomonas aeruginosa 2325 | GCF_002193685.1 latest |
92 | Contig | 6329 (129) | SAMN07185681 | human | not collected | wound | USA | 245 (paeruginosa) | JCVI |
Strain Details
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Pseudomonas aeruginosa 2328 | GCF_002193665.1 latest |
94 | Contig | 6154 (116) | SAMN07185687 | human | not collected | fasciotomy fluid | USA | 447 (paeruginosa) | JCVI |
Strain Details
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Pseudomonas aeruginosa 233/2 | GCF_022552195.1 latest |
- | Scaffold | 6210 (194) | SAMN23763319 | Russia: Samara | 245 (paeruginosa) | Pirogov Russian National Research Medical University |
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Pseudomonas aeruginosa 2330 | GCF_002193675.1 latest |
81 | Contig | 6488 (97) | SAMN07185686 | human | not collected | eye drainage | USA | 179 (paeruginosa) | JCVI |
Strain Details
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Pseudomonas aeruginosa 234, isolate 234 | GCF_902633005.1 latest |
- | Contig | 5898 (109) | SAMEA6109561 | throat swab | 274 (paeruginosa) | EBI |
Strain Details
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