This is a list of Pseudomonas strains for which annotations and sequences can be found in the Pseudomonas Genome Database. For a more comprehensive list of ongoing genome sequencing, transcriptome and epigenomic projects based on what are registered in the NCBI BioProject database, please check out our searchable, user-friendly listing of BioProjects.

By default, strains having completely sequenced genomes and draft genomes are shown, however you can filter the list by using the wide range of criteria below. We plan to expand the search functionality as the number of genomes sequenced grows and metadata standards mature.

Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).

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14230 strains returned

= Popular strains (Ordered by popular strains first, then by strain name, ascending)
Strain Assembly Contigs Assembly Level Genes (partial) BioSample Accession Host Organism Host Disease Isolation Source Location MLST Institution
Pseudomonas aeruginosa 08_0034 GCF_028435805.1
latest
- Contig 6637 (373) SAMN18869636 Cystic Fibrosis sputum Spain: Santander 111 (paeruginosa) ITACYL
Strain Details
Pseudomonas aeruginosa 09107 GCF_013285025.1
latest
- Scaffold 6410 (176) SAMN15010099 unknown Unknown France: Paris 233 (paeruginosa) University Hospital of Besancon
Strain Details
Pseudomonas aeruginosa 095M0019 GCF_020640795.1
latest
- Scaffold 6402 (214) SAMN22048344 bacteremia blood unknown 111 (paeruginosa) OHSU
Strain Details
Pseudomonas aeruginosa 0C2E isolate RP1 GCF_001500235.1
latest
102 Contig 6446 (158) SAMEA2342059 human cystic fibrosis cystic fibrosis airway 395 (paeruginosa) European Bioinformatics Institute
University Laval
Strain Details
Pseudomonas aeruginosa 0C4A isolate RP45 GCF_001500245.1
latest
65 Contig 5795 (106) SAMN04256133 human cystic fibrosis cystic fibrosis airway Germany: Hannover University Laval
Strain Details
Pseudomonas aeruginosa 0C4A, isolate 679 GCF_003698425.1
latest
- Contig 6036 (90) SAMN05226609 Poland: Wroclaw 198 (paeruginosa) University Laval
Strain Details
Pseudomonas aeruginosa 1 GCF_004370185.1
latest
- Scaffold 5986 (82) SAMN10478389 human cystic fibrosis sputum Canada: Chicoutimi 293 (paeruginosa) University Laval
Strain Details
Pseudomonas aeruginosa 1-13 GCF_015317885.1
latest
- Contig 6387 (505) SAMN14776823 Infection Intra-abdominal infection Portugal: Aveiro 235 (paeruginosa) Hospital Universitario Ramon y Cajal (IRYCIS)
Strain Details
Pseudomonas aeruginosa 10 - Assembly GCF_004351245.1 GCF_004351245.1
latest
- Contig 5909 (1195) SAMN10743665 infection hospital Italy: Trento 189 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 10 - Assembly GCF_004370105.1 GCF_004370105.1
latest
- Contig 5866 (110) SAMN10478398 human cystic fibrosis sputum Canada: Chicoutimi 2834 (paeruginosa) University Laval
Strain Details
Pseudomonas aeruginosa 10-58 GCF_015317915.1
latest
- Contig 6435 (485) SAMN14776820 Infection Low respiratory tract infection Portugal: Porto 244 (paeruginosa) Hospital Universitario Ramon y Cajal (IRYCIS)
Strain Details
Pseudomonas aeruginosa 101 - Assembly GCF_004350875.1 GCF_004350875.1
latest
- Contig 6094 (599) SAMN10743751 infection hospital Italy: Trento 1567 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 101 - Assembly GCF_021044445.1 GCF_021044445.1
latest
- Scaffold 5798 (46) SAMN21907132 missing Sweden 1094 (paeruginosa) Swedish University of Agricultural Sciences
Strain Details
Pseudomonas aeruginosa 102 GCF_004351295.1
latest
- Scaffold 6337 (1368) SAMN10743752 infection hospital Italy: Trento 175 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 10226 GCF_022424105.1
latest
- Contig 6428 (246) SAMN21357977 Not collected blood Brazil Universidade Federal de Sao Paulo
Strain Details
Pseudomonas aeruginosa 10262 GCF_013620565.1
latest
- Contig 5943 (167) SAMN14453403 lung United Kingdom 146 (paeruginosa) University of Oxford
Strain Details
Pseudomonas aeruginosa 10333 GCF_013620545.1
latest
- Contig 6004 (167) SAMN14453404 lung United Kingdom 146 (paeruginosa) University of Oxford
Strain Details
Pseudomonas aeruginosa 10420 GCF_020905615.1
latest
- Contig 5854 (114) SAMN19189631 Pseudomonas aeruginosa infection blood Mexico 252 (paeruginosa) UNIVERSIDAD EL BOSQUE
Strain Details
Pseudomonas aeruginosa 1042828174-20 GCF_004370505.1
latest
- Contig 5865 (394) SAMN10478367 human cystic fibrosis sputum Canada: Rouyn-Noranda 663 (paeruginosa) University Laval
Strain Details
Pseudomonas aeruginosa 1042828174-21 GCF_004370455.1
latest
- Contig 6228 (93) SAMN10478368 human cystic fibrosis sputum Canada: Rouyn-Noranda 845 (paeruginosa) University Laval
Strain Details