This is a list of Pseudomonas strains for which annotations and sequences can be found in the Pseudomonas Genome Database. For a more comprehensive list of ongoing genome sequencing, transcriptome and epigenomic projects based on what are registered in the NCBI BioProject database, please check out our searchable, user-friendly listing of BioProjects.

By default, strains having completely sequenced genomes and draft genomes are shown, however you can filter the list by using the wide range of criteria below. We plan to expand the search functionality as the number of genomes sequenced grows and metadata standards mature.

Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).

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14230 strains returned

= Popular strains (Ordered by popular strains first, then by strain name, ascending)
Strain Assembly Contigs Assembly Level Genes (partial) BioSample Accession Host Organism Host Disease Isolation Source Location MLST Institution
Pseudomonas aeruginosa 185345 GCF_019022575.1
latest
- Contig 5930 (157) SAMN18680952 Unknown blood France: Lyon 2548 (paeruginosa) French National Center for Antibiotics Resistance
Strain Details
Pseudomonas aeruginosa 185374 GCF_019022735.1
latest
- Contig 6343 (181) SAMN18680953 Unknown blood France: Saintes 244 (paeruginosa) French National Center for Antibiotics Resistance
Strain Details
Pseudomonas aeruginosa 185385 GCF_013284855.1
latest
- Scaffold 6266 (107) SAMN15010107 unknown Unknown France: Besancon 233 (paeruginosa) University Hospital of Besancon
Strain Details
Pseudomonas aeruginosa 185819 GCF_019022745.1
latest
- Contig 5899 (234) SAMN18680954 Unknown Expectoration France: Saint Brieuc 198 (paeruginosa) French National Center for Antibiotics Resistance
Strain Details
Pseudomonas aeruginosa 1889_S27 GCF_021061005.1
latest
- Contig 6553 (269) SAMN20752071 blood Spain 175 (paeruginosa) Instituto de Investigacion Sanitaria y Biomedica de Alicante
Strain Details
Pseudomonas aeruginosa 189/1 GCF_022552435.1
latest
- Scaffold 6029 (142) SAMN23763310 Russia: Samara 274 (paeruginosa) Pirogov Russian National Research Medical University
Strain Details
Pseudomonas aeruginosa 18A GCF_000341565.1
latest
179 Contig 5742 (301) SAMEA2272507 human cystic fibrosis sputum 788 (paeruginosa) European Bioinformatics Institute
UNSW
Strain Details
Pseudomonas aeruginosa 18G GCF_004373595.1
latest
- Scaffold 6072 (84) SAMN10478256 sandy soil contaminated with hydrocarbons for 50 years Canada: L Assomption University Laval
Strain Details
Pseudomonas aeruginosa 19 - Assembly GCF_004351135.1 GCF_004351135.1
latest
- Scaffold 6483 (1314) SAMN10743673 infection hospital Italy: Trento 308 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 19 - Assembly GCF_004370865.1 GCF_004370865.1
latest
- Contig 6259 (111) SAMN10478408 human cystic fibrosis sputum Canada: Chicoutimi 683 (paeruginosa) University Laval
Strain Details
Pseudomonas aeruginosa 19-026975 GCF_004795655.1
latest
- Contig 6923 (284) SAMN11380140 MISSING MISSING USA:California 111 (paeruginosa) Walter Reed Army Institute of Research
Strain Details
Pseudomonas aeruginosa 19-028480 GCF_004795665.1
latest
- Contig 6914 (203) SAMN11380141 MISSING MISSING USA:California 111 (paeruginosa) Walter Reed Army Institute of Research
Strain Details
Pseudomonas aeruginosa 19-032124 GCF_004795645.1
latest
- Contig 6791 (192) SAMN11380142 MISSING MISSING USA:California 111 (paeruginosa) Walter Reed Army Institute of Research
Strain Details
Pseudomonas aeruginosa 1903031130 GCF_016745195.1
latest
- Complete Genome 6355 (52) SAMN15834152 pneumonia sputum China: Henan 235 (paeruginosa) Beijing Institute of Microbiology and Epidemiology
Strain Details
Pseudomonas aeruginosa 191/1 GCF_022552375.1
latest
- Scaffold 6398 (154) SAMN23763311 Russia: Samara 252 (paeruginosa) Pirogov Russian National Research Medical University
Strain Details
Pseudomonas aeruginosa 192/4 GCF_022552295.1
latest
- Scaffold 6284 (157) SAMN23763312 Russia: Samara 319 (paeruginosa) Pirogov Russian National Research Medical University
Strain Details
Pseudomonas aeruginosa 192S190811BSL_PA1 GCF_004375535.1
latest
- Contig 5821 (76) SAMN10478154 human cystic fibrosis sputum Canada: Montreal University Laval
Strain Details
Pseudomonas aeruginosa 192S190811BSL_PA2 GCF_004375275.1
latest
- Contig 5850 (83) SAMN10478155 human cystic fibrosis sputum Canada: Montreal University Laval
Strain Details
Pseudomonas aeruginosa 192S190811BSL_PA3 GCF_004375265.1
latest
- Contig 5843 (91) SAMN10478156 human cystic fibrosis sputum Canada: Montreal University Laval
Strain Details
Pseudomonas aeruginosa 194WW GCF_025456605.1
latest
- Contig 6733 (203) SAMN28578941 wastewater Romania: Iasi 640 (paeruginosa) Research Institute of University of Bucharest - ICUB
Strain Details