This is a list of Pseudomonas strains for which annotations and sequences can be found in the Pseudomonas Genome Database. For a more comprehensive list of ongoing genome sequencing, transcriptome and epigenomic projects based on what are registered in the NCBI BioProject database, please check out our searchable, user-friendly listing of BioProjects.

By default, strains having completely sequenced genomes and draft genomes are shown, however you can filter the list by using the wide range of criteria below. We plan to expand the search functionality as the number of genomes sequenced grows and metadata standards mature.

Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).

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14230 strains returned

= Popular strains (Ordered by popular strains first, then by strain name, ascending)
Strain Assembly Contigs Assembly Level Genes (partial) BioSample Accession Host Organism Host Disease Isolation Source Location MLST Institution
Pseudomonas viridiflava 13_3a_2fr GCF_016307535.1
latest
- Scaffold 5214 (106) SAMN16885838 Greenhouse Turkey: Antalya University of Toronto Mississauga
Strain Details
Pseudomonas viridiflava 45C2 GCF_013522975.1
latest
- Contig 4921 (122) SAMN14085449 USA:Eugene Northwestern University
Strain Details
Pseudomonas viridiflava A2M176 GCF_022936465.1
latest
- Contig 5252 (63) SAMN26870984 Bing Chile:Malloa INIA Rayentue
Strain Details
Pseudomonas viridiflava BAV 2572 GCF_009765495.1
latest
- Scaffold 5364 (86) SAMN13012101 Precipitation USA: Virginia Virginia Tech
Strain Details
Pseudomonas viridiflava CC1582 GCF_000452505.1
latest
553 Scaffold 5400 (199) SAMN02471565 epilithon France
University of Arizona
Strain Details
Pseudomonas viridiflava CDRTc14 GCF_001716855.1
latest
38 Scaffold 5291 (26) SAMN05413107 Lepidium draba weed growing in a vineyard Austria: National Park of Illmitz AIT Austrian Institute of Technology GmbH
Strain Details
Pseudomonas viridiflava CFBP 1590 isolate E12-5 GCF_900184295.1
latest
- Complete Genome 5397 (40) SAMEA104090973 diseased cherry tree EBI
Strain Details
Pseudomonas viridiflava CFBP13507 GCF_005233675.1
latest
- Contig 5176 (104) SAMN09062491 Seed France INRA
Strain Details
Pseudomonas viridiflava CFBP13515 GCF_005233555.1
latest
- Contig 5164 (114) SAMN09064882 Seed France INRA
Strain Details
Pseudomonas viridiflava CFBP8799 GCF_014839005.1
latest
- Contig 5332 (135) SAMN16237943 Seed France INRAE
Strain Details
Pseudomonas viridiflava CFBP8802 GCF_014838925.1
latest
- Contig 5173 (104) SAMN16238274 Seed France INRAE
Strain Details
Pseudomonas viridiflava CH409 GCF_002406485.1
latest
80 Contig 5216 (70) SAMN07664227 thale cress roots University of British Columbia
Strain Details
Pseudomonas viridiflava DSM 6694 GCF_001305955.1
latest
188 Contig 5200 (59) SAMN03103695 runner bean (Dwarf) missing Switzerland CSIR-Institute of Microbial Technology
Strain Details
Pseudomonas viridiflava ICMP 11296 GCF_003700305.1
latest
- Scaffold 5245 (319) SAMN03976423 not collected New Zealand: Kumeu University of Toronto
Strain Details
Pseudomonas viridiflava ICMP 19473 GCF_003702045.1
latest
- Scaffold 4922 (124) SAMN03976365 not collected Iran: (Islamic Republic of): Sari, Mazandaran University of Toronto
Strain Details
Pseudomonas viridiflava ICMP 2848 GCF_001642795.1
latest
90 Scaffold 5209 (50) SAMN04102828 Phaseolus vulgaris Switzerland New Zealand Institute for Plant & Food research
Strain Details
Pseudomonas viridiflava ICMP 3272 GCF_003700335.1
latest
- Scaffold 5260 (216) SAMN03976434 not collected New Zealand: Riverhead University of Toronto
Strain Details
Pseudomonas viridiflava ICMP 8820 GCF_002723575.1
latest
41 Contig 5160 (153) SAMN04092610 New Zealand Institute for Plant & Food research
Strain Details
Pseudomonas viridiflava ICMP2848 GCF_001401215.1
latest
286 Scaffold 5180 (164) SAMN03976266 kidney bean not collected Switzerland University of Toronto
Strain Details
Pseudomonas viridiflava isolate p1.A10 GCF_900582605.1
latest
- Contig 5337 (152) SAMEA104471999 EBI
Max Planck Institute for Developmental Biology
Strain Details