This is a list of Pseudomonas strains for which annotations and sequences can be found in the Pseudomonas Genome Database. For a more comprehensive list of ongoing genome sequencing, transcriptome and epigenomic projects based on what are registered in the NCBI BioProject database, please check out our searchable, user-friendly listing of BioProjects.

By default, strains having completely sequenced genomes and draft genomes are shown, however you can filter the list by using the wide range of criteria below. We plan to expand the search functionality as the number of genomes sequenced grows and metadata standards mature.

Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).

Download options

14230 strains returned

= Popular strains (Ordered by popular strains first, then by strain name, ascending)
Strain Assembly Contigs Assembly Level Genes (partial) BioSample Accession Host Organism Host Disease Isolation Source Location MLST Institution
Pseudomonas umsongensis xwS5 GCF_013393265.1
latest
- Scaffold 6052 (202) SAMN09303050 not collected Hbtcm.edu.cn
Strain Details
Pseudomonas urethralis BML-PP042 - Assembly GCF_013373915.1 GCF_013373915.1
latest
- Contig 5749 (483) SAMD00229129 Japan:Tokyo Department of Microbiology, Juntendo University School of Medicine
Strain Details
Pseudomonas urethralis BML-PP042 - Assembly GCF_021602465.1 GCF_021602465.1
latest
- Contig 5577 (96) SAMD00422635 Japan:Saitama, Kawagoe Department of Microbiology, Juntendo University School of Medicine
Strain Details
Pseudomonas urmiensis SWRI10 - Assembly GCF_014268815.2 GCF_014268815.2
latest
- Contig 5155 (86) SAMN15248331 Wheat rhizosphere Iran: West Azerbaijan KU Leuven
Strain Details
Pseudomonas uvaldensis 20TX0172 GCF_021271205.1
latest
- Contig 5258 (103) SAMN21582561 USA: Texas Texas A & M University
Strain Details
Pseudomonas vancouverensis BS3656 GCF_900105825.1
latest
1 Chromosome 5855 (38) SAMN05216558 missing missing DOE Joint Genome Institute
Strain Details
Pseudomonas vancouverensis CCUG 49675 GCF_008801375.1
latest
- Contig 5958 (320) SAMN12697595 forest soil Canada: Vancouver University of Gothenburg - CCUG
Strain Details
Pseudomonas vancouverensis Dha-51 GCF_004348895.1
latest
- Contig 5839 (111) SAMN10506519 forest soil Canada: University of British Columbia Endowment Lands, Vancouver, BC University of British Columbia
Strain Details
Pseudomonas vanderleydeniana RW8P3 - Assembly GCF_014268755.2 GCF_014268755.2
latest
- Complete Genome 6269 (68) SAMN15248333 Rhizoplane rice Sri Lanka: Kurunegala KU Leuven
Strain Details
Pseudomonas veronii 1929 GCF_029269225.1
latest
- Contig 5976 (277) SAMN33601517 Oil sands tailings pond Canada: Alberta Universite Laval
Strain Details
Pseudomonas veronii 1YB2 GCF_000982395.1
latest
115 Contig 6986 (208) SAMN02692653 contaminated soil Czech Republic: Hradcany Bacterial Abiotic Stress and Survival Improvement Network
Helmholtz Centre for Infection Research
Strain Details
Pseudomonas veronii 1YdBTEX2 GCF_000350565.1
latest
63 Contig 5883 (35) SAMN02469887 contaminated soil Czech Republic
Helmholtz Centre for Infection Research
Strain Details
Pseudomonas veronii A-6-5 GCF_003970115.1
latest
- Scaffold 6640 (283) SAMN10593019 Groundwater sampled from observation wells of deep repository of liquid radioactive waste Russia: Tomsk region, Seversk Research Center of Biotechnology RAS
Strain Details
Pseudomonas veronii B560 GCF_025421655.1
latest
- Contig 6670 (262) SAMN30644902 soil Germany Karlsruhe Institute of Technology
Strain Details
Pseudomonas veronii DM15 GCF_012274305.1
latest
- Contig 5844 (153) SAMN14342341 soil China:Zhejiang Institute of Subtropical Agriculture, Chinese Academy of Sciences.
Strain Details
Pseudomonas veronii DSM 11331 GCF_001439695.1
latest
95 Contig 6117 (100) SAMN03328800 mineral water France: Contrexeville, Pavillon Spring Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM
Strain Details
Pseudomonas veronii DSM 16272 GCF_012985365.1
latest
- Contig 7118 (322) SAMN14381991 sediment Netherlands Technische Universitaet Muenchen
Strain Details
Pseudomonas veronii G2 GCF_021233455.1
latest
- Complete Genome 6259 (154) SAMN23966549 former landfill site for plastics Germany:State of Brandenburg,Potsdam-Mittelmark, NIEMGK BAM Bundesanstalt fuer Materialforschung und -pruefung
Strain Details
Pseudomonas veronii IB04 GCF_016406005.1
latest
- Scaffold 6316 (252) SAMN16411057 wastewater Denmark:Kongens Lyngby Technical University of Denmark
Strain Details
Pseudomonas veronii isolate 11V4441 GCF_903970695.1
latest
- Chromosome 6427 (200) SAMEA6819934 EBI
Strain Details