This is a list of Pseudomonas strains for which annotations and sequences can be found in the Pseudomonas Genome Database. For a more comprehensive list of ongoing genome sequencing, transcriptome and epigenomic projects based on what are registered in the NCBI BioProject database, please check out our searchable, user-friendly listing of BioProjects.

By default, strains having completely sequenced genomes and draft genomes are shown, however you can filter the list by using the wide range of criteria below. We plan to expand the search functionality as the number of genomes sequenced grows and metadata standards mature.

Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).

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14230 strains returned

= Popular strains (Ordered by popular strains first, then by strain name, ascending)
Strain Assembly Contigs Assembly Level Genes (partial) BioSample Accession Host Organism Host Disease Isolation Source Location MLST Institution
Pseudomonas aeruginosa 131709 GCF_013284985.1
latest
- Scaffold 6501 (328) SAMN15010101 unknown Bones France: Toulouse 233 (paeruginosa) University Hospital of Besancon
Strain Details
Pseudomonas aeruginosa 132 GCF_004350275.1
latest
- Scaffold 6494 (772) SAMN10743779 infection hospital Italy: Trento 235 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 1324_PAER GCF_001061585.1
latest
1090 Scaffold 7379 (1235) SAMN03197304 human USA: WA 253 (paeruginosa) University of Washington
Strain Details
Pseudomonas aeruginosa 133 GCF_004350615.1
latest
- Scaffold 5960 (1059) SAMN10743780 infection hospital Italy: Trento University of Trento
Strain Details
Pseudomonas aeruginosa 1334/14 GCF_004193735.1
latest
- Complete Genome 6519 (86) SAMN10880118 conjunctiva infection eye Poland 234 (paeruginosa) National Medicines Institute
Strain Details
Pseudomonas aeruginosa 1336_PAER GCF_001076225.1
latest
152 Scaffold 5847 (145) SAMN03197317 human USA: WA 2653 (paeruginosa) University of Washington
Strain Details
Pseudomonas aeruginosa 134 GCF_004350265.1
latest
- Scaffold 5755 (873) SAMN10743781 infection hospital Italy: Trento 1704 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 135 GCF_004350255.1
latest
- Scaffold 6561 (744) SAMN10743782 infection hospital Italy: Trento 175 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 135/3 GCF_022552485.1
latest
- Scaffold 5772 (114) SAMN23763306 Russia: Samara 3005 (paeruginosa) Pirogov Russian National Research Medical University
Strain Details
Pseudomonas aeruginosa 136S260811BSL_PA1 GCF_004375385.1
latest
- Contig 5892 (65) SAMN10478146 human cystic fibrosis sputum Canada: Montreal 514 (paeruginosa) University Laval
Strain Details
Pseudomonas aeruginosa 136S260811BSL_PA2 GCF_004375405.1
latest
- Contig 5888 (70) SAMN10478147 human cystic fibrosis sputum Canada: Montreal 514 (paeruginosa) University Laval
Strain Details
Pseudomonas aeruginosa 136S260811BSL_PA3 GCF_004375585.1
latest
- Contig 5901 (65) SAMN10478148 human cystic fibrosis sputum Canada: Montreal 514 (paeruginosa) University Laval
Strain Details
Pseudomonas aeruginosa 138 GCF_004350215.1
latest
- Scaffold 6114 (1703) SAMN10743784 infection hospital Italy: Trento 313 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 139 GCF_004350565.1
latest
- Contig 6465 (207) SAMN10743785 infection hospital Italy: Trento 235 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 139124 GCF_013620065.1
latest
- Contig 5904 (169) SAMN14453428 lung United Kingdom University of Oxford
Strain Details
Pseudomonas aeruginosa 139125 GCF_013620005.1
latest
- Contig 5926 (175) SAMN14453429 lung United Kingdom 146 (paeruginosa) University of Oxford
Strain Details
Pseudomonas aeruginosa 13_0950 GCF_028435695.1
latest
- Contig 5934 (265) SAMN18869649 Cystic Fibrosis sputum Spain: Santander 253 (paeruginosa) ITACYL
Strain Details
Pseudomonas aeruginosa 14-0035 GCF_028435485.1
latest
- Contig 6430 (258) SAMN18869700 Non-Cystic Fibrosis Bronchiectasis sputum Spain: Santander 313 (paeruginosa) ITACYL
Strain Details
Pseudomonas aeruginosa 14-0116 GCF_028435445.1
latest
- Contig 6757 (323) SAMN18869698 Non-Cystic Fibrosis Bronchiectasis bronchoalveolar lavage Spain: Santander 111 (paeruginosa) ITACYL
Strain Details
Pseudomonas aeruginosa 14-0421 GCF_028435585.1
latest
- Contig 5965 (141) SAMN18869661 Cystic Fibrosis sputum Spain: Santander 2238 (paeruginosa) ITACYL
Strain Details