This is a list of Pseudomonas strains for which annotations and sequences can be found in the Pseudomonas Genome Database. For a more comprehensive list of ongoing genome sequencing, transcriptome and epigenomic projects based on what are registered in the NCBI BioProject database, please check out our searchable, user-friendly listing of BioProjects.

By default, strains having completely sequenced genomes and draft genomes are shown, however you can filter the list by using the wide range of criteria below. We plan to expand the search functionality as the number of genomes sequenced grows and metadata standards mature.

Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).

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14230 strains returned

= Popular strains (Ordered by popular strains first, then by strain name, ascending)
Strain Assembly Contigs Assembly Level Genes (partial) BioSample Accession Host Organism Host Disease Isolation Source Location MLST Institution
Pseudomonas aeruginosa 12294 GCF_020905575.1
latest
- Contig 6630 (285) SAMN19189667 Pseudomonas aeruginosa infection blood Mexico 309 (paeruginosa) UNIVERSIDAD EL BOSQUE
Strain Details
Pseudomonas aeruginosa 124/1 GCF_022552635.1
latest
- Scaffold 5942 (91) SAMN23763304 Russia: Samara 685 (paeruginosa) Pirogov Russian National Research Medical University
Strain Details
Pseudomonas aeruginosa 124/2 GCF_022552475.1
latest
- Contig 5902 (96) SAMN23763305 Russia: Samara Pirogov Russian National Research Medical University
Strain Details
Pseudomonas aeruginosa 1268_PAER GCF_001060735.1
latest
217 Scaffold 6342 (209) SAMN03197236 human USA: WA 17 (paeruginosa) University of Washington
Strain Details
Pseudomonas aeruginosa 128 GCF_004350655.1
latest
- Scaffold 6292 (2052) SAMN10743775 infection hospital Italy: Trento University of Trento
Strain Details
Pseudomonas aeruginosa 12866 GCF_013284995.1
latest
- Scaffold 6299 (168) SAMN15010100 unknown Unknown France: Besancon 233 (paeruginosa) University Hospital of Besancon
Strain Details
Pseudomonas aeruginosa 128S180412BSL_PA2 GCF_004375375.1
latest
- Contig 6197 (86) SAMN10478145 human cystic fibrosis sputum Canada: Montreal University Laval
Strain Details
Pseudomonas aeruginosa 12939 GCF_002753655.1
latest
- Complete Genome 6193 (82) SAMN07831757 human 1420 (paeruginosa) Beijing Institute of Microbiology and Epidemiology
Strain Details
Pseudomonas aeruginosa 12_0805 GCF_028435765.1
latest
- Contig 5985 (301) SAMN18869641 Cystic Fibrosis sputum Spain: Santander ITACYL
Strain Details
Pseudomonas aeruginosa 12_5984 GCF_028435745.1
latest
- Contig 6698 (415) SAMN18869642 Cystic Fibrosis Pharyngeal swab Spain: Santander 253 (paeruginosa) ITACYL
Strain Details
Pseudomonas aeruginosa 12_6494 GCF_020102795.1
latest
- Contig 5793 (150) SAMN15616585 Cystic fibrosis tracheal aspirate Spain: Santander ITACYL
Strain Details
Pseudomonas aeruginosa 13 - Assembly GCF_004351815.1 GCF_004351815.1
latest
- Scaffold 6222 (534) SAMN10743668 infection hospital Italy: Trento University of Trento
Strain Details
Pseudomonas aeruginosa 13 - Assembly GCF_004370075.1 GCF_004370075.1
latest
- Contig 6443 (160) SAMN10478401 human cystic fibrosis sputum Canada: Chicoutimi 253 (paeruginosa) University Laval
Strain Details
Pseudomonas aeruginosa 13-0439 GCF_028435405.1
latest
- Contig 5917 (227) SAMN18869705 Non-Cystic Fibrosis Bronchiectasis sputum Spain: Santander 2050 (paeruginosa) ITACYL
Strain Details
Pseudomonas aeruginosa 13-3150 GCF_028435425.1
latest
- Contig 6448 (196) SAMN18869702 Non-Cystic Fibrosis Bronchiectasis sputum Spain: Santander 17 (paeruginosa) ITACYL
Strain Details
Pseudomonas aeruginosa 13-3298 GCF_028435515.1
latest
- Contig 6213 (94) SAMN18869672 Cystic Fibrosis sputum Spain: Santander 155 (paeruginosa) ITACYL
Strain Details
Pseudomonas aeruginosa 13-4111 GCF_028435505.1
latest
- Contig 6517 (819) SAMN18869687 Non-Cystic Fibrosis Bronchiectasis sputum Spain: Santander 1249 (paeruginosa) ITACYL
Strain Details
Pseudomonas aeruginosa 130 GCF_002411845.1
latest
274 Contig 6469 (341) SAMN07692777 human Chronic wound infection wound swab 234 (paeruginosa) Norwegian National Advisory Unit on Detection of Antimicrobial Resistance
Strain Details
Pseudomonas aeruginosa 130_PAER GCF_001061475.1
latest
153 Scaffold 6411 (155) SAMN03197272 human USA: WA University of Washington
Strain Details
Pseudomonas aeruginosa 1311 GCF_003863865.1
latest
- Contig 5930 (236) SAMN10484661 human cystic fibrosis cystic fibrosis patient United Kingdom: Scotland, Queen Elizabeth University Hospital Glasgow 266 (paeruginosa) University of Aberdeen
Strain Details