NCBI BioSample Accession | SAMN06233741 |
Sample Title | Pathogen: clinical or host-associated sample from Pseudomonas aeruginosa |
Sample Name | Kasamber |
Species | Pseudomonas aeruginosa |
Strain | Kasamber |
BioProject | BioProject Details | BioProject Entry at NCBI |
Genome Project Sequencing Assays | |
Genome Project Sequence Assemblies | |
Host Species Common Name | human |
Host Species Taxonomic Name | Homo sapiens |
Host Taxonomy Id | 9606 |
Host Sex | male |
Host Age | 42 |
Host Disease | urinary tract infection |
Host Tissue Sampled | |
Sample Collection Date | |
Lat Lon | 15.36 N 32.32 E |
Geo Loc Name | Sudan:Khartoum |
Biome | |
Feature | |
Material | |
Comments | It was isolated from urine of male inpatient suffering from chronic UTI in military hospital in Khartoum, Sudan, Antimicrobial susceptibility test was done and reported as MDR. DNA was extracted and the species identified using 16s ribosomal DNA gene, then WGS was done for comparative genomic with susceptible strain and for characterization of antimicrobial resistant genes |
Specimen Collector Name | Mohamed Abdelrahman |
Specimen Collector Institution | International University of Africa |
Specimen Collector Email | mkasamber@gmail.com |
Biosample Taxonomy Id | 287 |