Pseudomonas
Genome DB
Advanced search | BLAST / DIAMOND / DNA motif searches | Retrieve sequence by coordinates | Downloads | Contact
   Current DB Version: 22.1 (2023-10-06)
  • Home
  • News
  • Acknowledgements
  • About
    • Development Team
    • PseudoCAP
    • Database Funding
    • Database FAQs
  • Search Annotations
    • Simple Text Search
    • Advanced Annotation Search
    • Pathway Annotations
    • GO Term Annotations
    • Annotation Updates
    • All Search Options
  • Search Sequences
    • BLASTN search (nucleotide versus nucleotide) against one or more strains
    • BLASTP search (protein versus protein) against single strain
    • BLASTX search (translated nucleotide versus protein) against single strain
    • DIAMOND BLASTP search (protein versus protein) against one or more strains (very fast)
    • DIAMOND BLASTX search (translated DNA versus protein) against one or more strains (very fast)
    • TBLASTN search (protein versus translated nucleotide database) against single strain
    • TBLASTX search (translated nucleotide versus translated nucleotide database) against single strain
    • Search for DNA motifs
    • Retrieve Sequences
    • All Search Options
  • Annotations By Category
    • Antimicrobial Resistance Gene Predictions
    • Annotation Updates Log
    • COG Mappings (PAO1)
    • Functional Domain Mappings (InterPro)
    • Gene Ontology (GO) Term Annotations
    • Orthologs
    • Pathogen Associated Genes
    • Pathway Annotations
    • Protein Drug Targets
    • Proteins With Human Homologs
    • Proteins With Known 3D Structures
    • Subcellular Localization Annotations
    • Transposon Insertions
    • Virulence Factor Evidence
    • Strains in this Database
    • NCBI Genome/Transcriptome Project Summaries
    • NCBI Gene Expression Datasets (GEO)
    • All Categories
  • Browsers
    • Genome Browser (JBrowse)
    • Metabolic Pathways (PseudoCyC)

Pseudomonas BioSamples

288 results were returned for your query 12345678910..15Next
Biosample Accession Species Strain Sample Title Specimen Collector Institution Sequencing Assays
SAMN03659118 Pseudomonas aeruginosa patient1 RIGHT LOWER subpopulation1 E6 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659117 Pseudomonas aeruginosa patient1 RIGHT LOWER subpopulation1 E5 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659116 Pseudomonas aeruginosa patient1 LEFT LOWER subpopulation7 E4 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659115 Pseudomonas aeruginosa patient1 LEFT LOWER subpopulation7 E3 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659114 Pseudomonas aeruginosa patient1 LEFT LOWER subpopulation7 E2 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659113 Pseudomonas aeruginosa patient1 LEFT LOWER subpopulation7 E1 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659112 Pseudomonas aeruginosa patient1 LEFT LOWER subpopulation3 D12 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659111 Pseudomonas aeruginosa patient1 LEFT LOWER subpopulation3 D11 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659110 Pseudomonas aeruginosa patient1 LEFT LOWER subpopulation3 D10 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659109 Pseudomonas aeruginosa patient1 LEFT LOWER subpopulation3 D9 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659108 Pseudomonas aeruginosa patient1 LEFT LOWER subpopulation1 D8 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659107 Pseudomonas aeruginosa patient1 LEFT LOWER subpopulation1 D7 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659106 Pseudomonas aeruginosa patient1 LEFT LOWER subpopulation1 D6 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659105 Pseudomonas aeruginosa patient1 LEFT LOWER subpopulation1 D5 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659104 Pseudomonas aeruginosa patient1 LEFT LOWER subpopulation1 D4 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659103 Pseudomonas aeruginosa patient1 LEFT LOWER subpopulation1 D3 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659102 Pseudomonas aeruginosa patient1 LEFT LOWER subpopulation1 D2 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659101 Pseudomonas aeruginosa patient1 LEFT LOWER subpopulation1 D1 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659100 Pseudomonas aeruginosa patient1 LINGULA subpopulation6 C12 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
SAMN03659099 Pseudomonas aeruginosa patient1 LINGULA subpopulation6 C11 University of Washington, Department of Microbiology, Miller Laboratory 0 Details
12345678910..15Next
  • Home
  • About
  • Search Annotations
  • Search Sequences
  • Annotations By Category
  • Related Links
  • Contact

If you have used this database, please ensure that you acknowledge this most recent Pseudomonas Genome Database publication rather than just the website URL. Thank you!

Winsor GL, Griffiths EJ, Lo R, Dhillon BK, Shay JA, Brinkman FS (2016).
Enhanced annotations and features for comparing thousands of Pseudomonas genomes in the Pseudomonas genome database.

Nucleic Acids Res. (2016) doi: 10.1093/nar/gkv1227 (Database issue). Pubmed: 26578582

The Pseudomonas Genome Database is managed by:

The Brinkman Lab at Simon Fraser University

Database development is supported by key funding from:

Cystic Fibrosis Foundation, Therapeutics

[Sign in]