Pseudomonas Project PRJNA369723
| Project Title | Denitrifying bacteria isolated from neutral and low pH soil; Genome sequencing and assembly |
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| Project Database | BioProject |
| Project Accession | PRJNA369723 |
| Organism Name | Pseudomonas sp. A25(2017) |
| Project Description | The capacity to denitrify is widespread among taxonomically diverse bacteria, but our knowledge about the biochemistry and physiology of this pathway and its regulation is based on intensive studies of a few model organisms. Recent in vivo studies of selected denitrifiers reveal large phenotypic variations, attributed to transcriptional regulation and post-transcriptional phenomena. This calls for systematic ecophysiological investigations of a wider range of denitrifiers. We designed an isolation protocol that identifies all possible combinations of truncated denitrification chains by end-point analyses (NO3-/NO2-/NH4+/NO/N2O/N2). Whole genome sequencing confirmed most truncations but also showed that phenotypes cannot be predicted solely from genetic potential. |
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Biosamples associated with this project
| Link | 1 BioSample(s) |