Pseudomonas Project PRJNA323624
| Project Title | Pseudomonas syringae pv. syringae Genome sequencing and assembly |
| Released | 2016-06-22 |
| Project Database | BioProject |
| Project Accession | PRJNA323624 |
| Organism Name | Pseudomonas syringae pv. syringae |
| Project Description | In recent years, the damage caused by bacterial pathogens to major crops has been increasing worldwide. Pseudomonas syringae is a widespread bacterial species that infects almost all major crops. Different P. syringae strains use a wide range of biochemical mechanisms, including phytotoxins and effectors of the type III and type IV secretion systems, which determine the specific nature of the pathogen virulence.Strains 1845 (isolated from dicots) and 2507 (isolated from monocots) were selected for sequencing because they specialize on different groups of plants. We compared virulence factors in these and other available genomes of phylogroup 2 to find genes responsible for the specialization of bacteria. We showed that strain 1845 belongs to the clonal group that has been infecting monocots in Russia and USA for a long time (at least 50 years). Strain 1845 has relatively recently changed its host plant to dicots. |
| Publication Citation | |
| Sample Provider Pi Institution | Russian Research Institute of Phytopathology |
| Sample Provider Pi Email |
External Links
Biosamples associated with this project
| Link | 2 BioSample(s) |