Pseudomonas NCBI BioProjects

This is a list of Pseudomonas species genome sequencing and transcriptome projects registered at NCBI. It contains Pseudomonas species projects available at NCBI that have AT LEAST one BioSample registered with them. Therefore, more projects may be available directly through NCBI's BioProject site. If you are looking for a list of strains that have their annotations and sequences stored in this database, please go to List of Strain-Specific Summaries and Analyses

Strain	Project Title	Project Database	Project Accession	Institution	Release Date	Samples
Pseudomonas aeruginosa	Pseudomonas aeruginosa Genome sequencing and assembly	BioProject	PRJNA198782	University of Ottawa	2013-12-11	24	Details
Pseudomonas	22 genomes from the Pseudomonas fluorescens group, genome sequencing and assembly	BioProject	PRJNA290438	JLU	2015-08-18	22	Details
Pseudomonas aeruginosa	ChIP-seq analyses of 10 quorum sensing regulators in Pseudomonas aeruginosa	BioProject	PRJNA273759	University of Chicago		20	Details
Pseudomonas putida DOT-T1E	Genome-wide maps of the effect of antimicrobial compounds in P. putida DOT-T1E	BioProject	PRJNA244431	Environmental Protection, EEZ / CSIC		18	Details
Pseudomonas veronii	Pseudomonas veronii 1YdBTEX2	BioProject	PRJNA327725	University of Lausanne		17	Details
Pseudomonas aeruginosa	Transcriptome study of Pseudomonas aeruginosa clinical strains	BioProject	PRJNA236589	Helmholtz Centre for Infection Research		16	Details
Pseudomonas aeruginosa PAO1	Pseudomonas aeruginosa Ceftolozane-Tazobactam Resistance Development Requires Multiple Mutations Leading to Overexpression and Structural Modification of AmpC.	BioProject	PRJNA252560	Prof. Susanne Häussler, Molecular Bacteriology, Helmholtz Centre for Infection Research		16	Details
Pseudomonas protegens	Phloroglucinol functions as an intercellular chemical messenger with broad transcriptional effects in Pseudomonas protegens	BioProject	PRJNA284756	Botany and Plant Pathology, Oregon State University		15	Details
Pseudomonas aeruginosa PA14	Pseudomonas aeruginosa RNA-seq and Tn-seq in sub-MIC antimicrobials	BioProject	PRJNA291292	University of Texas at Austin		15	Details
Pseudomonas aeruginosa PAO1	Pseudomonas aeruginosa PAO1 Raw sequence reads	BioProject	PRJNA293780	Nanyang Technological University		15	Details
Pseudomonas aeruginosa	RNA-seq study of major P.aeruginosa PA14 transcription factors	BioProject	PRJNA239334	Prof. Susanne Häussler, Molecular Bacteriology, Helmholtz Centre for Infection Research		14	Details
Pseudomonas aeruginosa	P.aeruginosa essential functions	BioProject	PRJNA273663	University of Washington		13	Details
Pseudomonas aeruginosa	Pseudomonas aeruginosa Outbreak in NICU 2015	BioProject	PRJNA296708	Centers for Disease Control and Prevention		12	Details
Pseudomonas aeruginosa	Chromatin Immunoprecipitation of HA-tagged PA14_69770 and RpoA in Pseudomonas aeruginosa UCBPP-PA14	BioProject	PRJNA276070	Newman Lab, GPS, California Institute of Technology/HHMI		12	Details
Pseudomonas aeruginosa UCBPP-PA14	Identification of the alternative sigma factor SigX regulon and its implications for Pseudomonas aeruginosa pathogenicity	BioProject	PRJNA219396	Prof. Susanne Häussler, Molecular Bacteriology, Helmholtz Centre for Infection Research		12	Details
Pseudomonas aeruginosa	Pseudomonas aeruginosa PA14 differential gene expression in bqsR (PA14_29730) mutants	BioProject	PRJNA273872	Dianne Newman, BBE and GPS, Caltech		12	Details
Pseudomonas aeruginosa	Pseudomonas aeruginosa Genome sequencing and assembly	BioProject	PRJNA200798	University of Strathclyde	2013-06-19	12	Details
Pseudomonas syringae	Chip-seq analysis of hrpRSL and Lon in Pseudomonas syringas	BioProject	PRJNA273995	University of Chicago		10	Details
Pseudomonas aeruginosa	Pseudomonas aeruginosa genome sequencing and assembly of selected isolates from Pirnay collection	BioProject	PRJNA294726	Technical University of Denmark		10	Details
Pseudomonas moraviensis R28-S	Experimentally evolved Pseudomonas moraviensis R28-S raw sequence reads	BioProject	PRJNA302005	University of Idaho		10	Details