Motif View

Internal ID 19094170
Source Database TransTermHP TERM 1109
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1109
Sequence GCGCTGCAATGCGC
Look for more occurrences
Start 4633898
End 4633911
Strand -
Genomic Context
Replicon Pseudomonas trivialis strain IHBB745, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACAAAAATAAAAAAA(5' tail) GCGC(5' stem) ATTGCA(loop) GCGC(3' stem) TTAGGGGGGTGCTCA(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685