| Internal ID | 19089570 | Source Database | TransTermHP TERM 1197 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1197
|
| Sequence |
TGAAAAAGGGCGGCCTAGGCCGCCCTTTTTCG Look for more occurrences |
| Start | 4561455 |
| End | 4561486 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain F22031, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GTCTCTGATCCATCA(5' tail) TGAAAAAGGGCGGC(5' stem) CTAG(loop) GCCGCCCTTTTTCG(3' stem) TTTTCCCCTTCTTGG(3' tail). Confidence: 100. opp_overlap 4561462, overlap 4561456 4561462 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|