| Internal ID | 19085044 | Source Database | TransTermHP TERM 231 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 231
|
| Sequence |
CGGCGTCCGCCGGGTTGCCTTCCCCTCGCAGGGAACCCGGCGCGTACGCCG Look for more occurrences |
| Start | 889053 |
| End | 889103 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas tuomuerensis strain JCM 14085 PT85_2, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TAGGGCAATAAAAAA(5' tail) CGGCGTACGCGCCGGGTTCCCTGC(5' stem) GAGGG(loop) GAAGGCAACCCGGCG-G-ACGCCG(3' stem) TTGTCCGCGATCCGC(3' tail). Confidence: 100. gap 2, opp_overlap 889051 889053, overlap 889090 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|