| Internal ID | 19084444 | Source Database | TransTermHP TERM 136 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 136
|
| Sequence |
CAATAAAAAAGGCCAACGCAAGCGTTGGCCTTTTTTATTTG Look for more occurrences |
| Start | 500460 |
| End | 500500 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas taetrolens strain DSM 21104 4_596648_47.1758, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GTCTTAGTCCCCGCG(5' tail) C-AATAAAAAAGGCCAACG(5' stem) CAAG(loop) CGTTGGCCTTTTTTATTTG(3' stem) TATTACACCCGCATC(3' tail). Confidence: 100. gap 1, opp_overlap 500470, overlap 500470 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|