Motif View

Internal ID 19083287
Source Database TransTermHP TERM 96
Feature Type terminator
Name
Rho-independent transcription terminator TERM 96
Sequence CGGTAAAGATCATGGGCGAGTCGATCGACCCGCCCATGATCTGGAACG
Look for more occurrences
Start 438324
End 438371
Strand -
Genomic Context
Replicon Pseudomonas syringae pv. coryli str. NCPPB 4273 contig4, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTTCATAAGGACGAA(5' tail) CGTTCCAGATCATGGGCGGGTC(5' stem) GATC(loop) GACTCGCCCATGATCTTTACCG(3' stem) GTTAAACGATGATGT(3' tail). Confidence: 100. opp_overlap 438331

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685