Motif View

Internal ID 19079001
Source Database TransTermHP TERM 943
Feature Type terminator
Name
Rho-independent transcription terminator TERM 943
Sequence GGCTGCCAACTGGCAGCC
Look for more occurrences
Start 4364433
End 4364450
Strand +
Genomic Context
Replicon Pseudomonas syringae pv. syringae B301D, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGGTTCTGAGAAAAG(5' tail) GGCTGCC(5' stem) AACT(loop) GGCAGCC(3' stem) TTTTTTATTTTTGTT(3' tail). Confidence: 100. opp_overlap 4364433 4364432

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685