Motif View

Internal ID 19077982
Source Database TransTermHP TERM 794
Feature Type terminator
Name
Rho-independent transcription terminator TERM 794
Sequence GCCGACCCGGCAACGGGTCGGC
Look for more occurrences
Start 3667280
End 3667301
Strand +
Genomic Context
Replicon Pseudomonas syringae pv. syringae HS191, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGGGATTATTGAAA(5' tail) GCCGACCCG(5' stem) GCAA(loop) CGGGTCGGC(3' stem) TTTTTTTTTGCCTGT(3' tail). Confidence: 100. opp_overlap 3667280

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685