Motif View

Internal ID 19073310
Source Database TransTermHP TERM 390
Feature Type terminator
Name
Rho-independent transcription terminator TERM 390
Sequence GGTCGCCGAGAGGCGGCC
Look for more occurrences
Start 1436110
End 1436127
Strand -
Genomic Context
Replicon Pseudomonas syringae CC1557, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCATCAAATAAAAAA(5' tail) GGCCGCC(5' stem) TCTC(loop) GGCGACC(3' stem) TCCTTTTTGTAGAAC(3' tail). Confidence: 100. opp_overlap 1436108 1436107 1436110

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685