Motif View

Internal ID 19066396
Source Database TransTermHP TERM 155
Feature Type terminator
Name
Rho-independent transcription terminator TERM 155
Sequence GTCCCGATTATTCCCGCTGCCAGACGACAGCGGGAATAATCGGCAG
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Start 918994
End 919039
Strand -
Genomic Context
Replicon Pseudomonas stutzeri strain 28a24, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGGAGGGCAAACTA(5' tail) CTGCCGATTATTCCCGCTGTC(5' stem) GTCT(loop) GGCAGCGGGAATAATCGGGAC(3' stem) CGGATCACCTAAGGC(3' tail). Confidence: 90. overlap 918991 919033

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685