Motif View

Internal ID 19063883
Source Database TransTermHP TERM 953
Feature Type terminator
Name
Rho-independent transcription terminator TERM 953
Sequence GGCCTTCGCGGCTTCAGCCGTGAAGGCC
Look for more occurrences
Start 4358003
End 4358030
Strand -
Genomic Context
Replicon Pseudomonas sp. StFLB209 DNA, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTGTACAAAACGAAA(5' tail) GGCCTTCACGGC(5' stem) TGAA(loop) GCCGCGAAGGCC(3' stem) AAACCCCTCACCCAT(3' tail). Confidence: 100. overlap 4357998

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685