| Internal ID | 19060284 | Source Database | TransTermHP TERM 5 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 5
|
| Sequence |
GCCCCGCAACCGCTCGTGATGCCAGAGCGGTTGCGGGGC Look for more occurrences |
| Start | 16437 |
| End | 16475 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas sp. PTA1 EW80DRAFT_scaffold00027.27_C, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GACTGACGGCAAAAA(5' tail) GCCCCGCAACCGCTC-TG(5' stem) GCAT(loop) CACGAGCGGTTGCGGGGC(3' stem) TTTATTTTTTTAGAA(3' tail). Confidence: 100. gap 1, opp_overlap 16433 16437 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|