| Internal ID | 19060283 | Source Database | TransTermHP TERM 4 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 4
|
| Sequence |
AAAAGCCCCGCAACCGCTCTGGCATCACGAGCGGTTGCGGGGCTTTA Look for more occurrences |
| Start | 16433 |
| End | 16479 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas sp. PTA1 EW80DRAFT_scaffold00027.27_C, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AACCGACTGACGGCA(5' tail) AAAAGCCCCGCAACCGCTC-TG(5' stem) GCAT(loop) CACGAGCGGTTGCGGGGCTTTA(3' stem) TTTTTTTAGAAACCT(3' tail). Confidence: 100. gap 1, opp_overlap 16437, overlap 16437 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|