| Internal ID | 19059923 | Source Database | TransTermHP TERM 2 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 2
|
| Sequence |
GCCTCCTGTGGGAGCTTGCTCGCGGAGGC Look for more occurrences |
| Start | 10145 |
| End | 10173 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas sp. PTA1 EW80DRAFT_scaffold00011.11_C, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TTGGCCTGACCGAAA(5' tail) GCCTCCTGTGGG(5' stem) AGCTTG(loop) CTCGC-GGAGGC(3' stem) TTTTTTTGGGGCGGT(3' tail). Confidence: 95. gap 1, opp_overlap 10145 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|