Motif View

Internal ID 19057892
Source Database TransTermHP TERM 757
Feature Type terminator
Name
Rho-independent transcription terminator TERM 757
Sequence CCATGACCCCGGCCACGAGCCGGGGTTATGC
Look for more occurrences
Start 3910524
End 3910554
Strand -
Genomic Context
Replicon Pseudomonas sp. MT-1.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCAGCGGTGCAAAAA(5' tail) GCATAACCCCGGC(5' stem) TCGTG(loop) GCCGGGGTCATGG(3' stem) TAGGGCTGTGTAGCA(3' tail). Confidence: 100. overlap 3910525

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685